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TUT7 terminal uridylyl transferase 7 [ Otolemur garnettii (small-eared galago) ]

Gene ID: 100941530, updated on 8-Mar-2024

Summary

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Gene symbol
TUT7
Gene description
terminal uridylyl transferase 7
See related
Ensembl:ENSOGAG00000015630
Gene type
protein coding
RefSeq status
MODEL
Organism
Otolemur garnettii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
Also known as
ZCCHC6
Orthologs
human mouse all
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Genomic context

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See TUT7 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
32
Annotation release Status Assembly Chr Location
102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852638.1 (403326..474855, complement)

NW_003852638.1Genomic Context describing neighboring genes Neighboring gene F-box/WD repeat-containing protein 12-like Neighboring gene iron-sulfur cluster assembly 1 Neighboring gene elongation factor 1-alpha 1 pseudogene Neighboring gene solute carrier family 25 member 44 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003852638 Unplaced Scaffold Reference OtoGar3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA uridylyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA 3' uridylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
terminal uridylyltransferase 7
Names
zinc finger CCHC-type containing 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OtoGar3

Genomic

  1. NW_003852638.1 Reference OtoGar3

    Range
    403326..474855 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023508303.1 → XP_023364071.1  terminal uridylyltransferase 7 isoform X1

    UniProtKB/TrEMBL
    H0XDP8
    Conserved Domains (3) summary
    cd05402
    Location:315 → 427
    NT_PAP_TUTase; Nucleotidyltransferase (NT) domain of poly(A) polymerases and terminal uridylyl transferases
    pfam16631
    Location:1372 → 1451
    TUTF7_u4; Unstructured region 4 on terminal uridylyltransferase 7
    cl27230
    Location:980 → 1311
    PAP_assoc; Cid1 family poly A polymerase

  2. XM_023508309.1 → XP_023364077.1  terminal uridylyltransferase 7 isoform X3

    UniProtKB/TrEMBL
    H0XDP8
    Related
    ENSOGAP00000014003.2, ENSOGAT00000015637.2
    Conserved Domains (5) summary
    cd05402
    Location:315 → 427
    NT_PAP_TUTase; Nucleotidyltransferase (NT) domain of poly(A) polymerases and terminal uridylyl transferases
    smart00343
    Location:1453 → 1469
    ZnF_C2HC; zinc finger
    smart00451
    Location:243 → 274
    ZnF_U1; U1-like zinc finger
    pfam16631
    Location:1372 → 1451
    TUTF7_u4; Unstructured region 4 on terminal uridylyltransferase 7
    cl27230
    Location:980 → 1311
    PAP_assoc; Cid1 family poly A polymerase

  3. XM_023508308.1 → XP_023364076.1  terminal uridylyltransferase 7 isoform X3

    UniProtKB/TrEMBL
    H0XDP8
    Conserved Domains (5) summary
    cd05402
    Location:315 → 427
    NT_PAP_TUTase; Nucleotidyltransferase (NT) domain of poly(A) polymerases and terminal uridylyl transferases
    smart00343
    Location:1453 → 1469
    ZnF_C2HC; zinc finger
    smart00451
    Location:243 → 274
    ZnF_U1; U1-like zinc finger
    pfam16631
    Location:1372 → 1451
    TUTF7_u4; Unstructured region 4 on terminal uridylyltransferase 7
    cl27230
    Location:980 → 1311
    PAP_assoc; Cid1 family poly A polymerase

  4. XM_023508304.1 → XP_023364072.1  terminal uridylyltransferase 7 isoform X1

    UniProtKB/TrEMBL
    H0XDP8
    Conserved Domains (3) summary
    cd05402
    Location:315 → 427
    NT_PAP_TUTase; Nucleotidyltransferase (NT) domain of poly(A) polymerases and terminal uridylyl transferases
    pfam16631
    Location:1372 → 1451
    TUTF7_u4; Unstructured region 4 on terminal uridylyltransferase 7
    cl27230
    Location:980 → 1311
    PAP_assoc; Cid1 family poly A polymerase

  5. XM_023508305.1 → XP_023364073.1  terminal uridylyltransferase 7 isoform X1

    UniProtKB/TrEMBL
    H0XDP8
    Conserved Domains (3) summary
    cd05402
    Location:315 → 427
    NT_PAP_TUTase; Nucleotidyltransferase (NT) domain of poly(A) polymerases and terminal uridylyl transferases
    pfam16631
    Location:1372 → 1451
    TUTF7_u4; Unstructured region 4 on terminal uridylyltransferase 7
    cl27230
    Location:980 → 1311
    PAP_assoc; Cid1 family poly A polymerase

  6. XM_023508307.1 → XP_023364075.1  terminal uridylyltransferase 7 isoform X3

    UniProtKB/TrEMBL
    H0XDP8
    Conserved Domains (5) summary
    cd05402
    Location:315 → 427
    NT_PAP_TUTase; Nucleotidyltransferase (NT) domain of poly(A) polymerases and terminal uridylyl transferases
    smart00343
    Location:1453 → 1469
    ZnF_C2HC; zinc finger
    smart00451
    Location:243 → 274
    ZnF_U1; U1-like zinc finger
    pfam16631
    Location:1372 → 1451
    TUTF7_u4; Unstructured region 4 on terminal uridylyltransferase 7
    cl27230
    Location:980 → 1311
    PAP_assoc; Cid1 family poly A polymerase

  7. XM_023508306.1 → XP_023364074.1  terminal uridylyltransferase 7 isoform X2

    UniProtKB/TrEMBL
    H0XDP8
    Conserved Domains (5) summary
    cd05402
    Location:315 → 427
    NT_PAP_TUTase; Nucleotidyltransferase (NT) domain of poly(A) polymerases and terminal uridylyl transferases
    smart00343
    Location:1453 → 1469
    ZnF_C2HC; zinc finger
    smart00451
    Location:243 → 274
    ZnF_U1; U1-like zinc finger
    pfam16631
    Location:1372 → 1451
    TUTF7_u4; Unstructured region 4 on terminal uridylyltransferase 7
    cl27230
    Location:980 → 1311
    PAP_assoc; Cid1 family poly A polymerase

  8. XM_012812994.2 → XP_012668448.1  terminal uridylyltransferase 7 isoform X1

    UniProtKB/TrEMBL
    H0XDP8
    Conserved Domains (3) summary
    cd05402
    Location:315 → 427
    NT_PAP_TUTase; Nucleotidyltransferase (NT) domain of poly(A) polymerases and terminal uridylyl transferases
    pfam16631
    Location:1372 → 1451
    TUTF7_u4; Unstructured region 4 on terminal uridylyltransferase 7
    cl27230
    Location:980 → 1311
    PAP_assoc; Cid1 family poly A polymerase

  9. XM_023508302.1 → XP_023364070.1  terminal uridylyltransferase 7 isoform X1

    UniProtKB/TrEMBL
    H0XDP8
    Conserved Domains (3) summary
    cd05402
    Location:315 → 427
    NT_PAP_TUTase; Nucleotidyltransferase (NT) domain of poly(A) polymerases and terminal uridylyl transferases
    pfam16631
    Location:1372 → 1451
    TUTF7_u4; Unstructured region 4 on terminal uridylyltransferase 7
    cl27230
    Location:980 → 1311
    PAP_assoc; Cid1 family poly A polymerase
Nucleotide Protein
Heading Accession and Version

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