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SEPTIN7 septin 7 [ Otolemur garnettii (small-eared galago) ]

Gene ID: 100940813, updated on 8-Mar-2024

Summary

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Gene symbol
SEPTIN7
Gene description
septin 7
See related
Ensembl:ENSOGAG00000006015
Gene type
protein coding
RefSeq status
MODEL
Organism
Otolemur garnettii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
Also known as
SEPT7
Orthologs
human mouse all
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Genomic context

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See SEPTIN7 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852423.1 (17362249..17453213)

NW_003852423.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene HERPUD family member 2 Neighboring gene U6 spliceosomal RNA Neighboring gene small nucleolar RNA SNORD47 Neighboring gene endonuclease/exonuclease/phosphatase family domain containing 1 Neighboring gene calcium-binding protein 39 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003852423 Unplaced Scaffold Reference OtoGar3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables molecular adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytoskeleton-dependent cytokinesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell division site IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of septin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in septin ring IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
septin-7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OtoGar3

Genomic

  1. NW_003852423.1 Reference OtoGar3

    Range
    17362249..17453213
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003788583.2 → XP_003788631.1  septin-7 isoform X2

    See identical proteins and their annotated locations for XP_003788631.1

    UniProtKB/TrEMBL
    H0XYP0
    Related
    ENSOGAP00000005381.2, ENSOGAT00000006020.2
    Conserved Domains (3) summary
    cd01850
    Location:46 → 316
    CDC_Septin; CDC/Septin GTPase family
    COG5019
    Location:28 → 409
    CDC3; Septin family protein [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]
    cl19842
    Location:337 → 434
    DUF2213; Uncharacterized protein conserved in bacteria (DUF2213)

  2. XM_023512413.1 → XP_023368181.1  septin-7 isoform X1

    UniProtKB/TrEMBL
    H0XYP0
    Conserved Domains (2) summary
    cd01850
    Location:47 → 317
    CDC_Septin; CDC/Septin GTPase family
    PRK12704
    Location:337 → 433
    PRK12704; phosphodiesterase; Provisional
Nucleotide Protein
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