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LOC100934965 beta-1,4-galactosyltransferase 3-like [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100934965, updated on 9-Nov-2023

Summary

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Gene symbol
LOC100934965
Gene description
beta-1,4-galactosyltransferase 3-like
See related
Ensembl:ENSSHAG00000005882
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
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Genomic context

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See LOC100934965 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
7
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 3 NC_045428.1 (596133844..596151801, complement)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 3 Unlocalized Scaffold NW_003832497.1 (199239..205524)

Chromosome 3 - NC_045428.1Genomic Context describing neighboring genes Neighboring gene sialic acid-binding Ig-like lectin 14 Neighboring gene sialic acid-binding Ig-like lectin 12 Neighboring gene cytosolic thiouridylase subunit 1 Neighboring gene kallikrein related peptidase 14

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045428.1 Reference mSarHar1.11 Primary Assembly

    Range
    596133844..596151801 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003766709.3 → XP_003766757.1  beta-1,4-galactosyltransferase 3-like

    UniProtKB/TrEMBL
    A0A7N4P0R4, G3VUB2
    Related
    ENSSHAP00000029871.1, ENSSHAT00000041389.1
    Conserved Domains (1) summary
    cd00899
    Location:120 → 337
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
Nucleotide Protein
Heading Accession and Version

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