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CRYBG1 crystallin beta-gamma domain containing 1 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100934712, updated on 8-Mar-2024

Summary

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Gene symbol
CRYBG1
Gene description
crystallin beta-gamma domain containing 1
See related
Ensembl:ENSSHAG00000012880
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Also known as
AIM1
Orthologs
human mouse all
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Genomic context

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See CRYBG1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
23
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 4 NC_045429.1 (195491253..195752543, complement)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 4 Unlocalized Scaffold NW_003838944.1 (1124612..1204172)

Chromosome 4 - NC_045429.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100914995 Neighboring gene reticulon 4 interacting protein 1 Neighboring gene glutaminyl-tRNA amidotransferase subunit QRSL1 Neighboring gene autophagy related 5 Neighboring gene PR/SET domain 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of eye lens IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lens development in camera-type eye IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in visual perception IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta/gamma crystallin domain-containing protein 1
Names
absent in melanoma 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045429.1 Reference mSarHar1.11 Primary Assembly

    Range
    195491253..195752543 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031964464.1 → XP_031820324.1  beta/gamma crystallin domain-containing protein 1 isoform X1

    Conserved Domains (2) summary
    cd00161
    Location:2161 → 2289
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00030
    Location:1792 → 1884
    Crystall; Beta/Gamma crystallin

  2. XM_012549255.3 → XP_012404709.2  beta/gamma crystallin domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    G3WI39
    Related
    ENSSHAP00000015094.2, ENSSHAT00000015220.2
    Conserved Domains (2) summary
    cd00161
    Location:1912 → 2040
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00030
    Location:1543 → 1635
    Crystall; Beta/Gamma crystallin
Nucleotide Protein
Heading Accession and Version

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