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GALM galactose mutarotase [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100931715, updated on 8-Mar-2024

Summary

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Gene symbol
GALM
Gene description
galactose mutarotase
See related
Ensembl:ENSSHAG00000016047
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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See GALM in Genome Data Viewer
Location:
chromosome: 2
Exon count:
7
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 2 NC_045427.1 (77193464..77244604)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 1 Unlocalized Scaffold NW_003816756.1 (2004273..2056463, complement)

Chromosome 2 - NC_045427.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116421347 Neighboring gene heterogeneous nuclear ribonucleoprotein L like Neighboring gene serine and arginine rich splicing factor 7 Neighboring gene gem nuclear organelle associated protein 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables aldose 1-epimerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in galactose catabolic process via UDP-galactose IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glucose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aldose 1-epimerase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045427.1 Reference mSarHar1.11 Primary Assembly

    Range
    77193464..77244604
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003758339.4 → XP_003758387.1  aldose 1-epimerase

    UniProtKB/TrEMBL
    G3WTZ9
    Related
    ENSSHAP00000018904.1, ENSSHAT00000019060.2
    Conserved Domains (1) summary
    cd09019
    Location:29 → 339
    galactose_mutarotase_like; galactose mutarotase_like
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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