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AGA aspartylglucosaminidase [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100930206, updated on 8-Mar-2024

Summary

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Gene symbol
AGA
Gene description
aspartylglucosaminidase
See related
Ensembl:ENSSHAG00000006591
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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See AGA in Genome Data Viewer
Location:
chromosome: 6
Exon count:
9
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 6 NC_045431.1 (108793456..108814763, complement)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 6 Unlocalized Scaffold NW_003846803.1 (242383..261053)

Chromosome 6 - NC_045431.1Genomic Context describing neighboring genes Neighboring gene elongation factor 1-gamma-like Neighboring gene vascular endothelial growth factor C Neighboring gene nei like DNA glycosylase 3 Neighboring gene eukaryotic translation initiation factor 3 subunit L pseudogene Neighboring gene cyclin-dependent kinase 11B-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deglycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045431.1 Reference mSarHar1.11 Primary Assembly

    Range
    108793456..108814763 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003773055.4 → XP_003773103.1  N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase

    UniProtKB/TrEMBL
    G3VWM7
    Related
    ENSSHAP00000007582.2, ENSSHAT00000007645.2
    Conserved Domains (1) summary
    cd04513
    Location:29 → 329
    Glycosylasparaginase; Glycosylasparaginase and similar proteins
Nucleotide Protein
Heading Accession and Version

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