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TMEM165 transmembrane protein 165 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100928576, updated on 8-Mar-2024

Summary

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Gene symbol
TMEM165
Gene description
transmembrane protein 165
See related
Ensembl:ENSSHAG00000006313
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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See TMEM165 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
6
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 6 NC_045431.1 (38935773..38956384)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 6 Unlocalized Scaffold NW_003846855.1 (218861..229241, complement)

Chromosome 6 - NC_045431.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116419877 Neighboring gene uncharacterized LOC116420147 Neighboring gene steroid 5 alpha-reductase 3 Neighboring gene clock circadian regulator Neighboring gene U6 spliceosomal RNA Neighboring gene phosducin like 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables manganese ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi calcium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in Golgi calcium ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in calcium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in manganese ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane protein 165

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045431.1 Reference mSarHar1.11 Primary Assembly

    Range
    38935773..38956384
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031944018.1 → XP_031799878.1  transmembrane protein 165

    UniProtKB/TrEMBL
    A0A7N4Q037, G3VVR0
    Related
    ENSSHAP00000007265.2, ENSSHAT00000007327.2
    Conserved Domains (1) summary
    COG2119
    Location:103 → 324
    Gdt1; Putative Ca2+/H+ antiporter, TMEM165/GDT1 family [General function prediction only]
Nucleotide Protein
Heading Accession and Version

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