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KIRREL1 kirre like nephrin family adhesion molecule 1 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100928459, updated on 8-Mar-2024

Summary

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Gene symbol
KIRREL1
Gene description
kirre like nephrin family adhesion molecule 1
See related
Ensembl:ENSSHAG00000008815
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Also known as
KIRREL
Orthologs
human mouse all
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Genomic context

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See KIRREL1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
15
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 4 NC_045429.1 (360578228..360621274)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 4 Unlocalized Scaffold NW_003838820.1 (463534..500877, complement)

Chromosome 4 - NC_045429.1Genomic Context describing neighboring genes Neighboring gene Fc receptor-like protein 4 Neighboring gene Fc receptor-like protein 3 Neighboring gene antigen-presenting glycoprotein CD1d Neighboring gene olfactory receptor 10T2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 1
Names
kin of IRRE like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045429.1 Reference mSarHar1.11 Primary Assembly

    Range
    360578228..360621274
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031968681.1 → XP_031824541.1  kin of IRRE-like protein 1

    UniProtKB/TrEMBL
    G3W451
    Related
    ENSSHAP00000010206.2, ENSSHAT00000010296.2
    Conserved Domains (5) summary
    pfam13927
    Location:309 → 374
    Ig_3; Immunoglobulin domain
    cd00096
    Location:326 → 330
    Ig; Ig strand B [structural motif]
    cd05759
    Location:123 → 220
    IgI_2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
    cd05898
    Location:392 → 489
    IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:23 → 117
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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