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TARS2 threonyl-tRNA synthetase 2, mitochondrial [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100927870, updated on 8-Mar-2024

Summary

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Gene symbol
TARS2
Gene description
threonyl-tRNA synthetase 2, mitochondrial
See related
Ensembl:ENSSHAG00000010286
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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See TARS2 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
17
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 4 NC_045429.1 (425789871..425801292)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 4 Unlocalized Scaffold NW_003839007.1 (663381..674063)

Chromosome 4 - NC_045429.1Genomic Context describing neighboring genes Neighboring gene pre-mRNA processing factor 3 Neighboring gene regulation of nuclear pre-mRNA domain containing 2 Neighboring gene extracellular matrix protein 1 Neighboring gene uncharacterized LOC116423426 Neighboring gene ADAMTS like 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables threonine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in threonyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
threonine--tRNA ligase, mitochondrial
Names
threonyl-tRNA synthetase 2, mitochondrial (putative)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045429.1 Reference mSarHar1.11 Primary Assembly

    Range
    425789871..425801292
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031967466.1 → XP_031823326.1  threonine--tRNA ligase, mitochondrial isoform X3

    UniProtKB/TrEMBL
    G3W989
    Conserved Domains (1) summary
    PLN02908
    Location:19 → 631
    PLN02908; threonyl-tRNA synthetase

  2. XM_031967464.1 → XP_031823324.1  threonine--tRNA ligase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A7N4PQS7
    Conserved Domains (1) summary
    PLN02908
    Location:19 → 664
    PLN02908; threonyl-tRNA synthetase

  3. XM_031967467.1 → XP_031823327.1  threonine--tRNA ligase, mitochondrial isoform X4

    Conserved Domains (1) summary
    PLN02908
    Location:19 → 531
    PLN02908; threonyl-tRNA synthetase

  4. XM_031967465.1 → XP_031823325.1  threonine--tRNA ligase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A7N4NM57, A0A7N4PQS7
    Related
    ENSSHAP00000024350.1, ENSSHAT00000051366.1
    Conserved Domains (1) summary
    PLN02908
    Location:19 → 705
    PLN02908; threonyl-tRNA synthetase
Nucleotide Protein
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