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AP1M2 adaptor related protein complex 1 subunit mu 2 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100926975, updated on 8-Mar-2024

Summary

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Gene symbol
AP1M2
Gene description
adaptor related protein complex 1 subunit mu 2
See related
Ensembl:ENSSHAG00000005131
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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See AP1M2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
12
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 1 NC_045426.1 (647186692..647196531, complement)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 2 Unlocalized Scaffold NW_003823414.1 (139792..149639)

Chromosome 1 - NC_045426.1Genomic Context describing neighboring genes Neighboring gene KRI1 homolog Neighboring gene uncharacterized LOC116420748 Neighboring gene cyclin dependent kinase inhibitor 2D Neighboring gene uncharacterized LOC116420749 Neighboring gene solute carrier family 44 member 2 (CTL2 blood group) Neighboring gene interleukin enhancer binding factor 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables clathrin adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of clathrin adaptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in clathrin-coated vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AP-1 complex subunit mu-2
Names
adaptor related protein complex 1 mu 2 subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045426.1 Reference mSarHar1.11 Primary Assembly

    Range
    647186692..647196531 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031947523.1 → XP_031803383.1  AP-1 complex subunit mu-2 isoform X1

    UniProtKB/TrEMBL
    A0A7N4PMM4
    Related
    ENSSHAP00000040765.1, ENSSHAT00000048351.1
    Conserved Domains (2) summary
    cd14835
    Location:4 → 142
    AP1_Mu_N; AP-1 complex subunit mu N-terminal domain
    cl10970
    Location:154 → 423
    AP_MHD_Cterm; C-terminal domain of adaptor protein (AP) complexes medium mu subunits and its homologs (MHD)

  2. XM_003760465.3 → XP_003760513.1  AP-1 complex subunit mu-2 isoform X2

    UniProtKB/TrEMBL
    A0A7N4PMM4
    Related
    ENSSHAP00000035705.1, ENSSHAT00000042521.1
    Conserved Domains (1) summary
    cl10970
    Location:154 → 421
    AP_MHD_Cterm; C-terminal domain of adaptor protein (AP) complexes medium mu subunits and its homologs (MHD)
Nucleotide Protein
Heading Accession and Version

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