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AP1G2 adaptor related protein complex 1 subunit gamma 2 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100926953, updated on 8-Mar-2024

Summary

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Gene symbol
AP1G2
Gene description
adaptor related protein complex 1 subunit gamma 2
See related
Ensembl:ENSSHAG00000015587
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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See AP1G2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
23
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 2 NC_045427.1 (494610210..494618644, complement)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 1 Unlocalized Scaffold NW_003816506.1 (1847469..1854029, complement)

Chromosome 2 - NC_045427.1Genomic Context describing neighboring genes Neighboring gene neuroguidin Neighboring gene zinc finger homeobox 2 Neighboring gene thiamine triphosphatase Neighboring gene junctophilin 4 Neighboring gene dehydrogenase/reductase SDR family member 2, mitochondrial

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables clathrin adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi to vacuole transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in receptor-mediated endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of AP-1 adaptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of membrane coat IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AP-1 complex subunit gamma-like 2
Names
adaptor related protein complex 1 gamma 2 subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045427.1 Reference mSarHar1.11 Primary Assembly

    Range
    494610210..494618644 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031955066.1 → XP_031810926.1  AP-1 complex subunit gamma-like 2 isoform X1

    UniProtKB/TrEMBL
    A0A7N4NJV5, A0A7N4V489
    Related
    ENSSHAP00000024501.1, ENSSHAT00000037094.1
    Conserved Domains (2) summary
    smart00809
    Location:672 → 780
    Alpha_adaptinC2; Adaptin C-terminal domain
    pfam01602
    Location:24 → 575
    Adaptin_N; Adaptin N terminal region

  2. XM_031955067.1 → XP_031810927.1  AP-1 complex subunit gamma-like 2 isoform X1

    UniProtKB/TrEMBL
    A0A7N4NJV5, A0A7N4V489
    Related
    ENSSHAP00000038166.1, ENSSHAT00000018518.2
    Conserved Domains (2) summary
    smart00809
    Location:672 → 780
    Alpha_adaptinC2; Adaptin C-terminal domain
    pfam01602
    Location:24 → 575
    Adaptin_N; Adaptin N terminal region

  3. XM_031955068.1 → XP_031810928.1  AP-1 complex subunit gamma-like 2 isoform X2

    UniProtKB/TrEMBL
    A0A7N4V489
    Conserved Domains (1) summary
    pfam01602
    Location:24 → 575
    Adaptin_N; Adaptin N terminal region
Nucleotide Protein
Heading Accession and Version

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