U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

GYG1 glycogenin 1 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100926747, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
GYG1
Gene description
glycogenin 1
See related
Ensembl:ENSSHAG00000002614
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See GYG1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
8
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 3 NC_045428.1 (43713097..43757611, complement)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 3 Unlocalized Scaffold NW_003831916.1 (35712..80523, complement)

Chromosome 3 - NC_045428.1Genomic Context describing neighboring genes Neighboring gene ceruloplasmin Neighboring gene HPS3 biogenesis of lysosomal organelles complex 2 subunit 1 Neighboring gene helicase like transcription factor Neighboring gene carboxypeptidase A3 Neighboring gene uncharacterized LOC111720080 Neighboring gene carboxypeptidase B1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
glycogenin-1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045428.1 Reference mSarHar1.11 Primary Assembly

    Range
    43713097..43757611 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012546501.3 → XP_012401955.1  glycogenin-1 isoform X1

    UniProtKB/TrEMBL
    A0A7N4NXC6
    Related
    ENSSHAP00000029928.1, ENSSHAT00000034666.1
    Conserved Domains (2) summary
    cd02537
    Location:4 → 254
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
    COG1442
    Location:9 → 221
    RfaJ; Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis]

  2. XM_031957793.1 → XP_031813653.1  glycogenin-1 isoform X2

    UniProtKB/TrEMBL
    G3VIF0
    Related
    ENSSHAP00000002954.2, ENSSHAT00000002987.2
    Conserved Domains (1) summary
    cd02537
    Location:4 → 254
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.