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SEPTIN12 septin 12 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100925497, updated on 8-Mar-2024

Summary

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Gene symbol
SEPTIN12
Gene description
septin 12
See related
Ensembl:ENSSHAG00000007036
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Also known as
SEPT12
Orthologs
human mouse all
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Genomic context

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See SEPTIN12 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
13
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 1 NC_045426.1 (312550036..312561417)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 2 Unlocalized Scaffold NW_003823547.1 (279265..288118)

Chromosome 1 - NC_045426.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116420374 Neighboring gene rogdi atypical leucine zipper Neighboring gene small integral membrane protein 22 Neighboring gene zinc finger protein 500 Neighboring gene dynein axonemal assembly factor 8 Neighboring gene ankyrin repeat and sterile alpha motif domain containing 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables molecular adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoskeleton-dependent cytokinesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell division site IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of septin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in septin ring IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
septin-12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045426.1 Reference mSarHar1.11 Primary Assembly

    Range
    312550036..312561417
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031945075.1 → XP_031800935.1  septin-12 isoform X2

    Conserved Domains (1) summary
    cd01850
    Location:56 → 301
    CDC_Septin; CDC/Septin GTPase family

  2. XM_031945088.1 → XP_031800948.1  septin-12 isoform X4

    Conserved Domains (1) summary
    cd01850
    Location:56 → 301
    CDC_Septin; CDC/Septin GTPase family

  3. XM_003761729.2 → XP_003761777.1  septin-12 isoform X1

    See identical proteins and their annotated locations for XP_003761777.1

    UniProtKB/TrEMBL
    G3VY57
    Conserved Domains (1) summary
    cd01850
    Location:56 → 326
    CDC_Septin; CDC/Septin GTPase family

  4. XM_012543000.2 → XP_012398454.1  septin-12 isoform X3

    Conserved Domains (1) summary
    cd01850
    Location:66 → 284
    CDC_Septin; CDC/Septin GTPase family

  5. XM_012542998.3 → XP_012398452.1  septin-12 isoform X1

    See identical proteins and their annotated locations for XP_012398452.1

    UniProtKB/TrEMBL
    G3VY57
    Related
    ENSSHAP00000008112.1, ENSSHAT00000008178.2
    Conserved Domains (1) summary
    cd01850
    Location:56 → 326
    CDC_Septin; CDC/Septin GTPase family

  6. XM_031945094.1 → XP_031800954.1  septin-12 isoform X5

    Conserved Domains (1) summary
    cd01850
    Location:9 → 270
    CDC_Septin; CDC/Septin GTPase family
Nucleotide Protein
Heading Accession and Version

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