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CARM1 coactivator associated arginine methyltransferase 1 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100925066, updated on 8-Mar-2024

Summary

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Gene symbol
CARM1
Gene description
coactivator associated arginine methyltransferase 1
See related
Ensembl:ENSSHAG00000005586
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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See CARM1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
16
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 1 NC_045426.1 (647812182..647863436)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 2 Unlocalized Scaffold NW_003823413.1 (166407..193690, complement)

Chromosome 1 - NC_045426.1Genomic Context describing neighboring genes Neighboring gene dynamin 2 Neighboring gene chromosome 1 C19orf38 homolog Neighboring gene transmembrane p24 trafficking protein 1 Neighboring gene translocase of inner mitochondrial membrane 29 Neighboring gene Yip1 domain family member 2 Neighboring gene SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-arginine N-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-arginine methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone-arginine methyltransferase CARM1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045426.1 Reference mSarHar1.11 Primary Assembly

    Range
    647812182..647863436
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031947547.1 → XP_031803407.1  histone-arginine methyltransferase CARM1 isoform X1

    UniProtKB/TrEMBL
    A0A7N4NZ51
    Related
    ENSSHAP00000030477.1, ENSSHAT00000024564.1
    Conserved Domains (2) summary
    cd02440
    Location:189 → 284
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    pfam11531
    Location:35 → 139
    CARM1; Coactivator-associated arginine methyltransferase 1 N terminal

  2. XM_031947548.1 → XP_031803408.1  histone-arginine methyltransferase CARM1 isoform X2

    UniProtKB/TrEMBL
    G3VTB2
    Related
    ENSSHAP00000006417.2, ENSSHAT00000006473.2
    Conserved Domains (2) summary
    cd02440
    Location:189 → 284
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    pfam11531
    Location:35 → 139
    CARM1; Coactivator-associated arginine methyltransferase 1 N terminal
Nucleotide Protein
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