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LYPLA1 lysophospholipase 1 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100924992, updated on 8-Mar-2024

Summary

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Gene symbol
LYPLA1
Gene description
lysophospholipase 1
See related
Ensembl:ENSSHAG00000027960
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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See LYPLA1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 1 NC_045426.1 (468540051..468577449)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 2 Unlocalized Scaffold NW_003824548.1 (4696..40297, complement)

Chromosome 1 - NC_045426.1Genomic Context describing neighboring genes Neighboring gene transcription factor SOX-17-like Neighboring gene mitochondrial ribosomal protein L15 Neighboring gene transcription elongation factor A1 Neighboring gene regulator of G protein signaling 20

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carboxylic ester hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables palmitoyl-(protein) hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein depalmitoylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acyl-protein thioesterase 1
Names
lysophospholipase I

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045426.1 Reference mSarHar1.11 Primary Assembly

    Range
    468540051..468577449
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031946399.1 → XP_031802259.1  acyl-protein thioesterase 1 isoform X3

    Conserved Domains (1) summary
    pfam02230
    Location:1 → 168
    Abhydrolase_2; Phospholipase/Carboxylesterase

  2. XM_031946397.1 → XP_031802257.1  acyl-protein thioesterase 1 isoform X2

  3. XM_031946395.1 → XP_031802255.1  acyl-protein thioesterase 1 isoform X1

    UniProtKB/TrEMBL
    A0A7N4PZI2
    Related
    ENSSHAP00000044743.1, ENSSHAT00000031083.1
    Conserved Domains (1) summary
    pfam02230
    Location:8 → 226
    Abhydrolase_2; Phospholipase/Carboxylesterase

  4. XM_031946398.1 → XP_031802258.1  acyl-protein thioesterase 1 isoform X2

Nucleotide Protein
Heading Accession and Version

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