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ALG13 ALG13 UDP-N-acetylglucosaminyltransferase subunit [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100924262, updated on 8-Mar-2024

Summary

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Gene symbol
ALG13
Gene description
ALG13 UDP-N-acetylglucosaminyltransferase subunit
See related
Ensembl:ENSSHAG00000015788
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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See ALG13 in Genome Data Viewer
Location:
chromosome: X
Exon count:
25
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) X NC_045432.1 (76966474..76999926, complement)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) X Unlocalized Scaffold NW_003849625.1 (1918990..1965383, complement)

Chromosome X - NC_045432.1Genomic Context describing neighboring genes Neighboring gene LHFPL tetraspan subfamily member 1 Neighboring gene transient receptor potential cation channel subfamily C member 5 Neighboring gene UDP-N-acetylglucosamine transferase subunit ALG13 homolog Neighboring gene serine rich and transmembrane domain containing 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13
Names
asparagine-linked glycosylation 13 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045432.1 Reference mSarHar1.11 Primary Assembly

    Range
    76966474..76999926 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031944462.1 → XP_031800322.1  putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 isoform X1

    UniProtKB/TrEMBL
    A0A7N4UZI7, G3WT41
    Related
    ENSSHAP00000018596.2, ENSSHAT00000018750.2
    Conserved Domains (2) summary
    cl02573
    Location:276 → 353
    Tudor_SF; Tudor domain superfamily
    cl19932
    Location:34 → 143
    OTU; OTU-like cysteine protease

  2. XM_031944463.1 → XP_031800323.1  putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 isoform X2

    UniProtKB/TrEMBL
    A0A7N4UZI7
    Conserved Domains (2) summary
    cl02573
    Location:276 → 352
    Tudor_SF; Tudor domain superfamily
    cl19932
    Location:34 → 143
    OTU; OTU-like cysteine protease
Nucleotide Protein
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