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TARS3 threonyl-tRNA synthetase 3 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100924164, updated on 8-Mar-2024

Summary

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Gene symbol
TARS3
Gene description
threonyl-tRNA synthetase 3
See related
Ensembl:ENSSHAG00000010266
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Also known as
TARSL2
Orthologs
human mouse all
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Genomic context

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See TARS3 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
19
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 2 NC_045427.1 (529945890..529977350)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 1 Unlocalized Scaffold NW_003816492.1 (656943..688706, complement)

Chromosome 2 - NC_045427.1Genomic Context describing neighboring genes Neighboring gene protein FAM204A pseudogene Neighboring gene tight junction protein 1 Neighboring gene uncharacterized LOC116421849 Neighboring gene TM2 domain containing 3 Neighboring gene uncharacterized LOC116421850

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables threonine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in threonyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
threonine--tRNA ligase 2, cytoplasmic
Names
threonyl-tRNA synthetase like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045427.1 Reference mSarHar1.11 Primary Assembly

    Range
    529945890..529977350
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012542831.3 → XP_012398285.2  threonine--tRNA ligase 2, cytoplasmic

    UniProtKB/TrEMBL
    G3W960
    Related
    ENSSHAP00000011965.2, ENSSHAT00000012063.2
    Conserved Domains (1) summary
    cl28417
    Location:131 → 796
    ThrS; Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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