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LOC100923835 aspartyl/asparaginyl beta-hydroxylase [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100923835, updated on 9-Nov-2023

Summary

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Gene symbol
LOC100923835
Gene description
aspartyl/asparaginyl beta-hydroxylase
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Also known as
ASPH
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Genomic context

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See LOC100923835 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
23
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 1 NC_045426.1 (459784834..459946616)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 2 Unlocalized Scaffold NW_003823262.1 (5580..197857)

Chromosome 1 - NC_045426.1Genomic Context describing neighboring genes Neighboring gene centromere protein V-like Neighboring gene aspartyl/asparaginyl beta-hydroxylase-like Neighboring gene clavesin 1 Neighboring gene uncharacterized LOC116420574

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-aspartic acid 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-aspartic acid hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aspartyl/asparaginyl beta-hydroxylase
Names
aspartate beta-hydroxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045426.1 Reference mSarHar1.11 Primary Assembly

    Range
    459784834..459946616
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031946358.1 → XP_031802218.1  aspartyl/asparaginyl beta-hydroxylase isoform X1

    Conserved Domains (3) summary
    COG4783
    Location:165 → 362
    YfgC; Putative Zn-dependent protease, contains TPR repeats [General function prediction only]
    sd00006
    Location:267 → 291
    TPR; TPR repeat [structural motif]
    pfam05118
    Location:400 → 554
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase

  2. XM_031946359.1 → XP_031802219.1  aspartyl/asparaginyl beta-hydroxylase isoform X2

    Conserved Domains (3) summary
    TIGR02917
    Location:100 → 264
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:206 → 230
    TPR; TPR repeat [structural motif]
    pfam05118
    Location:339 → 493
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase
Nucleotide Protein
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