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CHST10 carbohydrate sulfotransferase 10 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100923424, updated on 8-Mar-2024

Summary

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Gene symbol
CHST10
Gene description
carbohydrate sulfotransferase 10
See related
Ensembl:ENSSHAG00000027256
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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See CHST10 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
9
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 3 NC_045428.1 (228334209..228383260, complement)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 3 Unlocalized Scaffold NW_003831843.1 (50722..100240, complement)

Chromosome 3 - NC_045428.1Genomic Context describing neighboring genes Neighboring gene ALF transcription elongation factor 3 Neighboring gene LON peptidase N-terminal domain and ring finger 2 Neighboring gene uncharacterized LOC116423088 Neighboring gene histone H2A-beta, sperm-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045428.1 Reference mSarHar1.11 Primary Assembly

    Range
    228334209..228383260 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031959145.1 → XP_031815005.1  carbohydrate sulfotransferase 10 isoform X3

    Conserved Domains (1) summary
    pfam03567
    Location:70 → 302
    Sulfotransfer_2; Sulfotransferase family

  2. XM_003765657.4 → XP_003765705.2  carbohydrate sulfotransferase 10 isoform X1

    UniProtKB/TrEMBL
    A0A7N4PYC0
    Related
    ENSSHAP00000045252.1, ENSSHAT00000029597.1
    Conserved Domains (1) summary
    pfam03567
    Location:139 → 371
    Sulfotransfer_2; Sulfotransferase family

  3. XM_031959144.1 → XP_031815004.1  carbohydrate sulfotransferase 10 isoform X2

    UniProtKB/TrEMBL
    A0A7N4PI68
    Related
    ENSSHAP00000038056.1, ENSSHAT00000053009.1
    Conserved Domains (1) summary
    pfam03567
    Location:116 → 348
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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