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LYG2 lysozyme g2 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100922635, updated on 8-Mar-2024

Summary

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Gene symbol
LYG2
Gene description
lysozyme g2
See related
Ensembl:ENSSHAG00000020738
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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See LYG2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
7
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 3 NC_045428.1 (226884732..226911019, complement)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 3 Unlocalized Scaffold NW_003831842.1 (501338..507743, complement)

Chromosome 3 - NC_045428.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein L30 Neighboring gene lipoyltransferase 1 Neighboring gene microtubule interacting and trafficking domain containing 1 Neighboring gene lysozyme g1 Neighboring gene thioredoxin domain containing 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lysozyme activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in defense response to Gram-positive bacterium IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidoglycan catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysozyme g-like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045428.1 Reference mSarHar1.11 Primary Assembly

    Range
    226884732..226911019 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031959134.1 → XP_031814994.1  lysozyme g-like protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A7N4Q1F5
    Related
    ENSSHAP00000045710.1, ENSSHAT00000036996.1
    Conserved Domains (1) summary
    cl00222
    Location:47 → 174
    Lyz-like; lysozyme-like domains

  2. XM_012546149.2 → XP_012401603.1  lysozyme g-like protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A7N4UYT0
    Related
    ENSSHAP00000026550.1, ENSSHAT00000035397.1
    Conserved Domains (1) summary
    cd01021
    Location:56 → 210
    GEWL; Goose Egg White Lysozyme domain. Eukaryotic "goose-type" lysozymes (GEWL). These enzymes catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetylglucosamine (GlcNAc). Members include tunicate, Japanese ...
Nucleotide Protein
Heading Accession and Version

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