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RAB5C RAB5C, member RAS oncogene family [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100922389, updated on 8-Mar-2024

Summary

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Gene symbol
RAB5C
Gene description
RAB5C, member RAS oncogene family
See related
Ensembl:ENSSHAG00000005267
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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See RAB5C in Genome Data Viewer
Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 4 NC_045429.1 (337645911..337689978, complement)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 4 Unlocalized Scaffold NW_003838834.1 (148221..192459)

Chromosome 4 - NC_045429.1Genomic Context describing neighboring genes Neighboring gene DExH-box helicase 58 Neighboring gene lysine acetyltransferase 2A Neighboring gene potassium voltage-gated channel subfamily H member 4 Neighboring gene GH3 domain-containing protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein Rab-5C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045429.1 Reference mSarHar1.11 Primary Assembly

    Range
    337645911..337689978 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012548272.3 → XP_012403726.1  ras-related protein Rab-5C

    UniProtKB/TrEMBL
    G3VS97
    Related
    ENSSHAP00000006052.1, ENSSHAT00000006106.2
    Conserved Domains (1) summary
    cd01860
    Location:21 → 183
    Rab5_related; Rab-related GTPase family includes Rab5 and Rab22; regulates early endosome fusion
Nucleotide Protein
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