U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ALG9 ALG9 alpha-1,2-mannosyltransferase [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100922297, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
ALG9
Gene description
ALG9 alpha-1,2-mannosyltransferase
See related
Ensembl:ENSSHAG00000013552 Ensembl:ENSSHAG00000031064
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ALG9 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
20
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 3 NC_045428.1 (487808569..487941527, complement)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 3 Unlocalized Scaffold NW_003831671.1 (1272896..1404265)

Chromosome 3 - NC_045428.1Genomic Context describing neighboring genes Neighboring gene salt inducible kinase 2 Neighboring gene protein phosphatase 2 scaffold subunit Abeta Neighboring gene uncharacterized LOC111719792 Neighboring gene eukaryotic translation initiation factor 4E-binding protein 1 pseudogene Neighboring gene cilia and flagella associated protein 68 Neighboring gene chromosome 3 C11orf52 homolog Neighboring gene crystallin alpha B Neighboring gene heat shock protein family B (small) member 2 Neighboring gene DIX domain containing 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables rRNA (uridine-N3-)-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in rRNA base methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
alpha-1,2-mannosyltransferase ALG9
Names
asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045428.1 Reference mSarHar1.11 Primary Assembly

    Range
    487808569..487941527 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031961167.1 → XP_031817027.1  alpha-1,2-mannosyltransferase ALG9 isoform X1

    Conserved Domains (2) summary
    pfam03901
    Location:247 → 669
    Glyco_transf_22; Alg9-like mannosyltransferase family
    pfam10354
    Location:7 → 176
    DUF2431; Domain of unknown function (DUF2431)

  2. XM_031961169.1 → XP_031817029.1  alpha-1,2-mannosyltransferase ALG9 isoform X4

    UniProtKB/TrEMBL
    G3WKE8, G3WKF0
    Related
    ENSSHAP00000015905.2, ENSSHAT00000016035.2
    Conserved Domains (1) summary
    pfam03901
    Location:62 → 484
    Glyco_transf_22; Alg9-like mannosyltransferase family

  3. XM_031961168.1 → XP_031817028.1  alpha-1,2-mannosyltransferase ALG9 isoform X2

    Conserved Domains (2) summary
    pfam03901
    Location:247 → 669
    Glyco_transf_22; Alg9-like mannosyltransferase family
    pfam10354
    Location:7 → 176
    DUF2431; Domain of unknown function (DUF2431)

  4. XM_003764227.4 → XP_003764275.1  alpha-1,2-mannosyltransferase ALG9 isoform X3

    UniProtKB/TrEMBL
    A0A7N4PAK9
    Related
    ENSSHAP00000035030.1, ENSSHAT00000036773.1
    Conserved Domains (2) summary
    smart00896
    Location:525 → 619
    FDX-ACB; Ferredoxin-fold anticodon binding domain
    pfam10354
    Location:7 → 176
    DUF2431; Domain of unknown function (DUF2431)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.