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ACSL1 acyl-CoA synthetase long chain family member 1 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100920579, updated on 8-Mar-2024

Summary

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Gene symbol
ACSL1
Gene description
acyl-CoA synthetase long chain family member 1
See related
Ensembl:ENSSHAG00000007860
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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See ACSL1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
22
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 6 NC_045431.1 (117849706..117941601, complement)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 6 Unlocalized Scaffold NW_003846799.1 (359453..424961)

Chromosome 6 - NC_045431.1Genomic Context describing neighboring genes Neighboring gene serine/arginine repetitive matrix protein 1-like Neighboring gene caspase 3 Neighboring gene primase and DNA directed polymerase Neighboring gene centromere protein U Neighboring gene charged multivesicular body protein 1b Neighboring gene AN1-type zinc finger protein 2A-like Neighboring gene helt bHLH transcription factor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arachidonate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty-acyl-CoA biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
long-chain-fatty-acid--CoA ligase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045431.1 Reference mSarHar1.11 Primary Assembly

    Range
    117849706..117941601 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031942125.1 → XP_031797985.1  long-chain-fatty-acid--CoA ligase 1 isoform X3

    UniProtKB/TrEMBL
    G3W0W9
    Related
    ENSSHAP00000030003.1, ENSSHAT00000042936.1
    Conserved Domains (1) summary
    cd05927
    Location:116 → 720
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  2. XM_031942123.1 → XP_031797983.1  long-chain-fatty-acid--CoA ligase 1 isoform X1

    UniProtKB/TrEMBL
    G3W0W9
    Related
    ENSSHAP00000009074.2, ENSSHAT00000009150.2

  3. XM_031942124.1 → XP_031797984.1  long-chain-fatty-acid--CoA ligase 1 isoform X2

    UniProtKB/TrEMBL
    A0A7N4P117, A0A7N4P911
    Related
    ENSSHAP00000033531.1, ENSSHAT00000040484.1
Nucleotide Protein
Heading Accession and Version

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