U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SEPTIN9 septin 9 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100919426, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
SEPTIN9
Gene description
septin 9
See related
Ensembl:ENSSHAG00000006546
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Also known as
SEPT9
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SEPTIN9 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
14
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 4 NC_045429.1 (300086318..300363479)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 4 Unlocalized Scaffold NW_003838862.1 (236666..598823, complement)

Chromosome 4 - NC_045429.1Genomic Context describing neighboring genes Neighboring gene DNA-directed RNA polymerases I and III subunit RPAC2 Neighboring gene small Cajal body-specific RNA 16 Neighboring gene SEC14 like lipid binding 1 Neighboring gene 3-phosphoinositide-dependent protein kinase 1 pseudogene Neighboring gene trinucleotide repeat containing adaptor 6C

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables molecular adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoskeleton-dependent cytokinesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell division site IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of septin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in septin ring IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
septin-9

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045429.1 Reference mSarHar1.11 Primary Assembly

    Range
    300086318..300363479
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012548651.2 → XP_012404105.1  septin-9 isoform X2

    UniProtKB/TrEMBL
    A0A7N4NSI1
    Conserved Domains (2) summary
    cd01850
    Location:281 → 553
    CDC_Septin; CDC/Septin GTPase family
    COG5019
    Location:263 → 557
    CDC3; Septin family protein [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]

  2. XM_003768675.4 → XP_003768723.1  septin-9 isoform X1

    UniProtKB/TrEMBL
    A0A7N4NSI1, G3VWH9
    Related
    ENSSHAP00000007534.1, ENSSHAT00000007596.2
    Conserved Domains (2) summary
    cd01850
    Location:292 → 564
    CDC_Septin; CDC/Septin GTPase family
    COG5019
    Location:274 → 568
    CDC3; Septin family protein [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]

  3. XM_031965558.1 → XP_031821418.1  septin-9 isoform X3

    Conserved Domains (1) summary
    cd01850
    Location:44 → 316
    CDC_Septin; CDC/Septin GTPase family

  4. XM_012548652.3 → XP_012404106.1  septin-9 isoform X3

    Conserved Domains (1) summary
    cd01850
    Location:44 → 316
    CDC_Septin; CDC/Septin GTPase family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.