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GALNT17 polypeptide N-acetylgalactosaminyltransferase 17 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100918298, updated on 8-Mar-2024

Summary

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Gene symbol
GALNT17
Gene description
polypeptide N-acetylgalactosaminyltransferase 17
See related
Ensembl:ENSSHAG00000029485
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Also known as
WBSCR17
Orthologs
human mouse all
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Genomic context

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See GALNT17 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
12
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 4 NC_045429.1 (443230749..443650739, complement)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 4 Unlocalized Scaffold NW_003839012.1 (1764922..1801909, complement)

Chromosome 4 - NC_045429.1Genomic Context describing neighboring genes Neighboring gene calneuron 1 Neighboring gene 60S ribosomal protein L37a-like Neighboring gene activator of transcription and developmental regulator AUTS2 Neighboring gene uncharacterized LOC116423779

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 17
Names
Williams-Beuren syndrome chromosome region 17
putative polypeptide N-acetylgalactosaminyltransferase-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045429.1 Reference mSarHar1.11 Primary Assembly

    Range
    443230749..443650739 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031967901.1 → XP_031823761.1  polypeptide N-acetylgalactosaminyltransferase 17 isoform X1

    UniProtKB/TrEMBL
    A0A7N4PBA0, A0A7N4PT80
    Related
    ENSSHAP00000035829.1, ENSSHAT00000030446.1
    Conserved Domains (2) summary
    cd02510
    Location:155 → 454
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:465 → 589
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_031967902.1 → XP_031823762.1  polypeptide N-acetylgalactosaminyltransferase 17 isoform X2

    UniProtKB/TrEMBL
    A0A7N4PT80
    Related
    ENSSHAP00000042244.1, ENSSHAT00000047651.1
    Conserved Domains (2) summary
    cd02510
    Location:80 → 379
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:390 → 514
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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