U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

AFMID arylformamidase [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100918127, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
AFMID
Gene description
arylformamidase
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See AFMID in Genome Data Viewer
Location:
chromosome: 4
Exon count:
12
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 4 NC_045429.1 (301544682..301573431)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 4 Unlocalized Scaffold NW_003838860.1 (3311737..3337958, complement)

Chromosome 4 - NC_045429.1Genomic Context describing neighboring genes Neighboring gene synaptogyrin 2 Neighboring gene thymidine kinase 1 Neighboring gene baculoviral IAP repeat containing 5 Neighboring gene BSD domain-containing protein 1-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arylformamidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tryptophan catabolic process to kynurenine IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
kynurenine formamidase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045429.1 Reference mSarHar1.11 Primary Assembly

    Range
    301544682..301573431
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023502676.2 → XP_023358444.1  kynurenine formamidase isoform X3

    Conserved Domains (1) summary
    COG0657
    Location:64 → 195
    Aes; Acetyl esterase/lipase [Lipid transport and metabolism]

  2. XM_023502675.2 → XP_023358443.1  kynurenine formamidase isoform X2

    Conserved Domains (1) summary
    cl21494
    Location:120 → 246
    Abhydrolase; alpha/beta hydrolases

  3. XM_012548626.3 → XP_012404080.1  kynurenine formamidase isoform X1

    Conserved Domains (2) summary
    COG0657
    Location:64 → 276
    Aes; Acetyl esterase/lipase [Lipid transport and metabolism]
    cl21494
    Location:150 → 276
    Abhydrolase; alpha/beta hydrolases
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.