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MGAT3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100917350, updated on 8-Mar-2024

Summary

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Gene symbol
MGAT3
Gene description
beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase
See related
Ensembl:ENSSHAG00000014264
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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See MGAT3 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
4
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 5 NC_045430.1 (12087555..12144869, complement)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 5 Unlocalized Scaffold NW_003843601.1 (1430937..1432690, complement)

Chromosome 5 - NC_045430.1Genomic Context describing neighboring genes Neighboring gene activating transcription factor 4 Neighboring gene mitochondrial elongation factor 1 Neighboring gene TGF-beta activated kinase 1 (MAP3K7) binding protein 1 Neighboring gene synaptogyrin 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase
Names
mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045430.1 Reference mSarHar1.11 Primary Assembly

    Range
    12087555..12144869 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031940067.1 → XP_031795927.1  beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A7N4P606
    Conserved Domains (1) summary
    pfam04724
    Location:212 → 509
    Glyco_transf_17; Glycosyltransferase family 17

  2. XM_031940070.1 → XP_031795930.1  beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A7N4P606, G3WMW1
    Related
    ENSSHAP00000016766.1, ENSSHAT00000016908.2
    Conserved Domains (1) summary
    pfam04724
    Location:208 → 505
    Glyco_transf_17; Glycosyltransferase family 17

  3. XM_031940069.1 → XP_031795929.1  beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A7N4P606, G3WMW1
    Related
    ENSSHAP00000031307.1, ENSSHAT00000032985.1
    Conserved Domains (1) summary
    pfam04724
    Location:208 → 505
    Glyco_transf_17; Glycosyltransferase family 17

  4. XM_031940068.1 → XP_031795928.1  beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A7N4P606, G3WMW1
    Related
    ENSSHAP00000026761.1, ENSSHAT00000041815.1
    Conserved Domains (1) summary
    pfam04724
    Location:208 → 505
    Glyco_transf_17; Glycosyltransferase family 17
Nucleotide Protein
Heading Accession and Version

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