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GXYLT1 glucoside xylosyltransferase 1 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100914661, updated on 8-Mar-2024

Summary

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Gene symbol
GXYLT1
Gene description
glucoside xylosyltransferase 1
See related
Ensembl:ENSSHAG00000000990
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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See GXYLT1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 5 NC_045430.1 (100626279..100703590, complement)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 5 Unlocalized Scaffold NW_003843833.1 (6105..134944)

Chromosome 5 - NC_045430.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116419224 Neighboring gene plakophilin 2 Neighboring gene contactin 1 Neighboring gene CCR4-NOT transcription complex subunit 2 Neighboring gene uncharacterized LOC100920914

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucoside xylosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045430.1 Reference mSarHar1.11 Primary Assembly

    Range
    100626279..100703590 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031938166.1 → XP_031794026.1  glucoside xylosyltransferase 1 isoform X3

    UniProtKB/TrEMBL
    A0A7N4PEF6
    Related
    ENSSHAP00000037221.1, ENSSHAT00000039980.1
    Conserved Domains (1) summary
    cl11394
    Location:118 → 377
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  2. XM_012551672.3 → XP_012407126.1  glucoside xylosyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    G3VD51
    Related
    ENSSHAP00000001105.1, ENSSHAT00000001120.2
    Conserved Domains (2) summary
    cd06430
    Location:118 → 419
    GT8_like_2; GT8_like_2 represents a subfamily of GT8 with unknown function
    COG1442
    Location:147 → 347
    RfaJ; Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis]

  3. XM_003772452.4 → XP_003772500.1  glucoside xylosyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A7N4PDN1, G3VD51
    Related
    ENSSHAP00000036230.1, ENSSHAT00000044066.1
    Conserved Domains (2) summary
    cd06430
    Location:86 → 387
    GT8_like_2; GT8_like_2 represents a subfamily of GT8 with unknown function
    COG1442
    Location:115 → 315
    RfaJ; Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis]

  4. XM_031938167.1 → XP_031794027.1  glucoside xylosyltransferase 1 isoform X4

    Conserved Domains (1) summary
    cd06430
    Location:30 → 331
    GT8_like_2; GT8_like_2 represents a subfamily of GT8 with unknown function
Nucleotide Protein
Heading Accession and Version

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