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GAA alpha glucosidase [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100914209, updated on 8-Mar-2024

Summary

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Gene symbol
GAA
Gene description
alpha glucosidase
See related
Ensembl:ENSSHAG00000006285
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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See GAA in Genome Data Viewer
Location:
chromosome: 4
Exon count:
22
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 4 NC_045429.1 (304675570..304702294)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 4 Unlocalized Scaffold NW_003838860.1 (218856..248123, complement)

Chromosome 4 - NC_045429.1Genomic Context describing neighboring genes Neighboring gene TBC1 domain family member 16 Neighboring gene uncharacterized LOC116423245 Neighboring gene coiled-coil domain 40 molecular ruler complex subunit Neighboring gene uncharacterized LOC116423246 Neighboring gene eukaryotic translation initiation factor 4A3 Neighboring gene ADP/ATP translocase 3-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lysosome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysosomal alpha-glucosidase
Names
glucosidase alpha, acid

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045429.1 Reference mSarHar1.11 Primary Assembly

    Range
    304675570..304702294
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023502670.2 → XP_023358438.1  lysosomal alpha-glucosidase isoform X1

    UniProtKB/TrEMBL
    G3VVM7
    Related
    ENSSHAP00000007232.1, ENSSHAT00000007294.2
    Conserved Domains (3) summary
    COG1501
    Location:124 → 936
    YicI; Alpha-glucosidase, glycosyl hydrolase family GH31 [Carbohydrate transport and metabolism]
    cd06602
    Location:362 → 720
    GH31_MGAM_SI_GAA; maltase-glucoamylase, sucrase-isomaltase, lysosomal acid alpha-glucosidase
    pfam00088
    Location:86 → 132
    Trefoil; Trefoil (P-type) domain

  2. XM_023502672.2 → XP_023358440.1  lysosomal alpha-glucosidase isoform X2

    Conserved Domains (3) summary
    COG1501
    Location:124 → 919
    YicI; Alpha-glucosidase, glycosyl hydrolase family GH31 [Carbohydrate transport and metabolism]
    cd06602
    Location:362 → 720
    GH31_MGAM_SI_GAA; maltase-glucoamylase, sucrase-isomaltase, lysosomal acid alpha-glucosidase
    pfam00088
    Location:86 → 132
    Trefoil; Trefoil (P-type) domain

  3. XM_003768657.4 → XP_003768705.1  lysosomal alpha-glucosidase isoform X1

    UniProtKB/TrEMBL
    G3VVM7
    Conserved Domains (3) summary
    COG1501
    Location:124 → 936
    YicI; Alpha-glucosidase, glycosyl hydrolase family GH31 [Carbohydrate transport and metabolism]
    cd06602
    Location:362 → 720
    GH31_MGAM_SI_GAA; maltase-glucoamylase, sucrase-isomaltase, lysosomal acid alpha-glucosidase
    pfam00088
    Location:86 → 132
    Trefoil; Trefoil (P-type) domain

  4. XM_023502671.2 → XP_023358439.1  lysosomal alpha-glucosidase isoform X1

    UniProtKB/TrEMBL
    G3VVM7
    Conserved Domains (3) summary
    COG1501
    Location:124 → 936
    YicI; Alpha-glucosidase, glycosyl hydrolase family GH31 [Carbohydrate transport and metabolism]
    cd06602
    Location:362 → 720
    GH31_MGAM_SI_GAA; maltase-glucoamylase, sucrase-isomaltase, lysosomal acid alpha-glucosidase
    pfam00088
    Location:86 → 132
    Trefoil; Trefoil (P-type) domain
Nucleotide Protein
Heading Accession and Version

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