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PIGN phosphatidylinositol glycan anchor biosynthesis class N [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100914174, updated on 8-Mar-2024

Summary

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Gene symbol
PIGN
Gene description
phosphatidylinositol glycan anchor biosynthesis class N
See related
Ensembl:ENSSHAG00000014300
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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See PIGN in Genome Data Viewer
Location:
chromosome: 1
Exon count:
31
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 1 NC_045426.1 (427803109..427997933, complement)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 2 Unlocalized Scaffold NW_003823244.1 (1439442..1575828, complement)

Chromosome 1 - NC_045426.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 152 Neighboring gene uncharacterized LOC116421282 Neighboring gene RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing Neighboring gene TNF receptor superfamily member 11a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannose-ethanolamine phosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI ethanolamine phosphate transferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045426.1 Reference mSarHar1.11 Primary Assembly

    Range
    427803109..427997933 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031946172.1 → XP_031802032.1  GPI ethanolamine phosphate transferase 1 isoform X1

    UniProtKB/TrEMBL
    G3WN04
    Related
    ENSSHAP00000016809.2, ENSSHAT00000016951.2
    Conserved Domains (2) summary
    cd16020
    Location:42 → 347
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N
    pfam04987
    Location:433 → 889
    PigN; Phosphatidylinositolglycan class N (PIG-N)

  2. XM_031946173.1 → XP_031802033.1  GPI ethanolamine phosphate transferase 1 isoform X1

    UniProtKB/TrEMBL
    G3WN04
    Conserved Domains (2) summary
    cd16020
    Location:42 → 347
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N
    pfam04987
    Location:433 → 889
    PigN; Phosphatidylinositolglycan class N (PIG-N)

  3. XM_031946174.1 → XP_031802034.1  GPI ethanolamine phosphate transferase 1 isoform X2

    Conserved Domains (2) summary
    pfam04987
    Location:268 → 724
    PigN; Phosphatidylinositolglycan class N (PIG-N)
    cl23718
    Location:19 → 182
    ALP_like; alkaline phosphatases and sulfatases

RNA

  1. XR_004230913.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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