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PLA2R1 phospholipase A2 receptor 1 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100913499, updated on 8-Mar-2024

Summary

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Gene symbol
PLA2R1
Gene description
phospholipase A2 receptor 1
See related
Ensembl:ENSSHAG00000009638
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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See PLA2R1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
31
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 3 NC_045428.1 (415582326..415734048)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 3 Unlocalized Scaffold NW_003831637.1 (569303..720647, complement)

Chromosome 3 - NC_045428.1Genomic Context describing neighboring genes Neighboring gene RNA binding motif single stranded interacting protein 1 Neighboring gene integrin subunit beta 6 Neighboring gene small ubiquitin-related modifier 2 pseudogene Neighboring gene CD302 antigen

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
secretory phospholipase A2 receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045428.1 Reference mSarHar1.11 Primary Assembly

    Range
    415582326..415734048
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023499238.2 → XP_023355006.1  secretory phospholipase A2 receptor isoform X1

    UniProtKB/TrEMBL
    A0A7N4NUX9, A0A7N4Q011
    Related
    ENSSHAP00000028860.1, ENSSHAT00000033385.1
    Conserved Domains (4) summary
    smart00059
    Location:181 → 229
    FN2; Fibronectin type 2 domain
    cd00037
    Location:252 → 366
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    smart00034
    Location:386 → 510
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    smart00458
    Location:61 → 161
    RICIN; Ricin-type beta-trefoil

  2. XM_031960589.1 → XP_031816449.1  secretory phospholipase A2 receptor isoform X2

    UniProtKB/TrEMBL
    A0A7N4Q011, G3W6Z4
    Related
    ENSSHAP00000011199.2, ENSSHAT00000011293.2
    Conserved Domains (4) summary
    smart00059
    Location:181 → 229
    FN2; Fibronectin type 2 domain
    cd00037
    Location:252 → 366
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    smart00034
    Location:386 → 510
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    smart00458
    Location:61 → 161
    RICIN; Ricin-type beta-trefoil
Nucleotide Protein
Heading Accession and Version

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