U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC100913276 probable polypeptide N-acetylgalactosaminyltransferase 8 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100913276, updated on 9-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC100913276
Gene description
probable polypeptide N-acetylgalactosaminyltransferase 8
See related
Ensembl:ENSSHAG00000002491
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC100913276 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
12
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 5 NC_045430.1 (57784090..57807815, complement)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 5 Unlocalized Scaffold NW_003843626.1 (33580..56106, complement)

Chromosome 5 - NC_045430.1Genomic Context describing neighboring genes Neighboring gene tetraspanin 8 Neighboring gene probable polypeptide N-acetylgalactosaminyltransferase 8 Neighboring gene probable polypeptide N-acetylgalactosaminyltransferase 8 Neighboring gene NADH:ubiquinone oxidoreductase subunit A9

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
probable polypeptide N-acetylgalactosaminyltransferase 8

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045430.1 Reference mSarHar1.11 Primary Assembly

    Range
    57784090..57807815 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031938982.1 → XP_031794842.1  probable polypeptide N-acetylgalactosaminyltransferase 8 isoform X3

    Conserved Domains (2) summary
    pfam00652
    Location:339 → 465
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
    cl11394
    Location:27 → 328
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  2. XM_031938980.1 → XP_031794840.1  probable polypeptide N-acetylgalactosaminyltransferase 8 isoform X2

    UniProtKB/TrEMBL
    A0A7N4NGY6, G3VI10
    Related
    ENSSHAP00000023043.1, ENSSHAT00000027971.1
    Conserved Domains (2) summary
    pfam00652
    Location:454 → 580
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
    cl11394
    Location:142 → 443
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  3. XM_031938981.1 → XP_031794841.1  probable polypeptide N-acetylgalactosaminyltransferase 8 isoform X3

    Conserved Domains (2) summary
    pfam00652
    Location:339 → 465
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
    cl11394
    Location:27 → 328
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  4. XM_003771298.3 → XP_003771346.3  probable polypeptide N-acetylgalactosaminyltransferase 8 isoform X1

    UniProtKB/TrEMBL
    G3VI10
    Related
    ENSSHAP00000002814.2, ENSSHAT00000002846.2
    Conserved Domains (2) summary
    pfam00652
    Location:491 → 617
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
    cl11394
    Location:179 → 480
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases