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LOC100911990 uncharacterized LOC100911990 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100911990, discontinued on 26-Mar-2024
  • This record was withdrawn by the Rat Genome Database (RGD).

Summary

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Symbol
LOC100911990provided by RGD
Full Name
uncharacterized LOC100911990provided by RGD
Primary source
RGD:6489189
Gene type
ncRNA
RefSeq status
WITHDRAWN
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
DISCONTINUED: This record was withdrawn by the Rat Genome Database (RGD).
Expression
Biased expression in Adrenal (RPKM 31.7), Heart (RPKM 28.8) and 9 other tissues See more
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Genomic context

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See LOC100911990 in Genome Data Viewer
Location:
11q11
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_06 latest, but not current mRatBN7.2 (GCF_015227675.2) 11 NC_051346.1 (29981108..29983672)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 11 NC_005110.4 (30893429..30895694)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_015227675.2-RS_2023_06 (NOTE: not current)

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRatBN7.2 Primary Assembly

Genomic

  1. NC_051346.1 Reference mRatBN7.2 Primary Assembly

    Range
    29981108..29983672
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_005491192.1 RNA Sequence

  2. XR_005491193.1 RNA Sequence

  3. XR_005491194.1 RNA Sequence

  4. XR_146216.5 RNA Sequence

  5. XR_005491195.1 RNA Sequence

Gene LinkOut

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