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LOC100905820 homeobox protein OTX2-like [ Galendromus occidentalis (western predatory mite) ]

Gene ID: 100905820, updated on 1-Aug-2024

Summary

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Gene symbol
LOC100905820
Gene description
homeobox protein OTX2-like
See related
EnsemblRapid:LOC100905820
Gene type
protein coding
RefSeq status
MODEL
Organism
Galendromus occidentalis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Mesostigmata; Gamasina; Phytoseioidea; Phytoseiidae; Typhlodrominae; Galendromus
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Genomic context

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See LOC100905820 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
102 current Mocc_1.0 (GCF_000255335.1) Unplaced Scaffold NW_003805238.1 (73767..83140)

NW_003805238.1Genomic Context describing neighboring genes Neighboring gene ubiquitin-conjugating enzyme E2 J2-like Neighboring gene homeobox protein OTX1 Neighboring gene histone deacetylase complex subunit SAP130 Neighboring gene hsc70-interacting protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003805238 Unplaced Scaffold Reference Mocc_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox protein OTX2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Galendromus occidentalis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mocc_1.0 Primary Assembly

Genomic

  1. NW_003805238.1 Reference Mocc_1.0 Primary Assembly

    Range
    73767..83140
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018639001.1 → XP_018494517.1  homeobox protein OTX2-like

    UniProtKB/TrEMBL
    A0AAJ7L3D5
    Related
    XP_018494517.1, XM_018639001.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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