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gpa2 glycoprotein hormone alpha-2 [ Strongylocentrotus purpuratus (purple sea urchin) ]

Gene ID: 100889174, updated on 14-Dec-2023

Summary

Gene symbol
gpa2
Gene description
glycoprotein hormone alpha-2
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Strongylocentrotus purpuratus
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Camarodonta; Echinidea; Strongylocentrotidae; Strongylocentrotus
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Genomic context

See gpa2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
102 current Spur_5.0 (GCF_000002235.5) Unplaced Scaffold NW_022145611.1 (25666014..25680023, complement)
Build 3.1 previous assembly Spur_3.1 (GCF_000002235.3) Unplaced Scaffold NW_003577186.1 (668556..707374, complement)

NW_022145611.1Genomic Context describing neighboring genes Neighboring gene glycoprotein hormone alpha-2 Neighboring gene glycoprotein hormone beta-5 Neighboring gene 39S ribosomal protein L48, mitochondrial Neighboring gene UDP-glucuronosyltransferase 2C1

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hormone receptor binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in cell surface receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
glycoprotein hormone alpha-2
Names
TPA: putative glycoprotein hormone-alpha2
putative glycoprotein hormone-alpha2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001281753.1NP_001268682.1  glycoprotein hormone alpha-2 precursor

    See identical proteins and their annotated locations for NP_001268682.1

    Status: PROVISIONAL

    Source sequence(s)
    BN001247
    UniProtKB/TrEMBL
    C6SUP8
    Conserved Domains (1) summary
    cl21545
    Location:47123
    GHB_like; Glycoprotein hormone beta chain homologues

RefSeqs of Annotated Genomes: Strongylocentrotus purpuratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Spur_5.0 Primary Assembly

Genomic

  1. NW_022145611.1 Reference Spur_5.0 Primary Assembly

    Range
    25666014..25680023 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011672527.2XP_011670829.1  glycoprotein hormone alpha-2 isoform X1

    See identical proteins and their annotated locations for XP_011670829.1

    UniProtKB/TrEMBL
    C6SUP8
    Conserved Domains (1) summary
    cl21545
    Location:47123
    GHB_like; Glycoprotein hormone beta chain homologues