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EGFLAM-AS1 EGFLAM antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100874117, updated on 22-Oct-2024

Summary

Official Symbol
EGFLAM-AS1provided by HGNC
Official Full Name
EGFLAM antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:41169
See related
Ensembl:ENSG00000249491 AllianceGenome:HGNC:41169
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See EGFLAM-AS1 in Genome Data Viewer
Location:
5p13.1
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (38424855..38427376, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (38673923..38676444, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (38424957..38427478, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene EGF like, fibronectin type III and laminin G domains Neighboring gene EGFLAM antisense RNA 4 Neighboring gene Sharpr-MPRA regulatory region 7458 Neighboring gene EGFLAM antisense RNA 2 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr5:38426700-38427899 Neighboring gene 60S ribosomal protein L27-like Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15980 Neighboring gene uncharacterized LOC124900965

Genomic regions, transcripts, and products

General gene information

Other Names

  • CTD-2108O9.1
  • EGFLAM antisense RNA 1 (non-protein coding)
  • lncRNA low expressed in gastric cancer
  • lncRNA-LOWEG

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_046737.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC091839
    Related
    ENST00000508986.2

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    38424855..38427376 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    38673923..38676444 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)