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KCNAB1-AS2 KCNAB1 antisense RNA 2 [ Homo sapiens (human) ]

Gene ID: 100874083, updated on 10-Oct-2023

Summary

Official Symbol
KCNAB1-AS2provided by HGNC
Official Full Name
KCNAB1 antisense RNA 2provided by HGNC
Primary source
HGNC:HGNC:40315
See related
Ensembl:ENSG00000240596 AllianceGenome:HGNC:40315
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See KCNAB1-AS2 in Genome Data Viewer
Location:
3q25.31
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (156215560..156227883, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (158990190..159002523, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (155933349..155945672, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene MRE11 homolog, double strand break repair nuclease pseudogene 1 Neighboring gene potassium voltage-gated channel subfamily A regulatory beta subunit 1 Neighboring gene ReSE screen-validated silencer GRCh37_chr3:155895222-155895424 Neighboring gene SNRNP40 pseudogene 1 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:156001911-156002494 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:156008688-156009444 Neighboring gene NANOG hESC enhancer GRCh37_chr3:156029203-156029704 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr3:156034549-156035748 Neighboring gene uncharacterized LOC124906298 Neighboring gene KCNAB1 antisense RNA 1 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr3:156174295-156175494

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_046617.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC091607, AI792872
    Related
    ENST00000473876.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    156215560..156227883 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    158990190..159002523 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)