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RPSAP64 ribosomal protein SA pseudogene 64 [ Homo sapiens (human) ]

Gene ID: 100873797, updated on 17-Sep-2024

Summary

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Official Symbol
RPSAP64provided by HGNC
Official Full Name
ribosomal protein SA pseudogene 64provided by HGNC
Primary source
HGNC:HGNC:39642
See related
Ensembl:ENSG00000227721 AllianceGenome:HGNC:39642
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RPSAP64 in Genome Data Viewer
Location:
21q22.2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 21 NC_000021.9 (38894914..38895195)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 21 NC_060945.1 (37278659..37278940)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 21 NC_000021.8 (40266838..40267119)

Chromosome 21 - NC_000021.9Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr21:40176652-40177152 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13312 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13313 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13314 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13315 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13316 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr21:40182837-40184036 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr21:40185951-40187150 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr21:40194325-40194862 Neighboring gene ETS proto-oncogene 2, transcription factor Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr21:40203265-40204464 Neighboring gene uncharacterized LOC101928398 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13317 Neighboring gene ETS2 antisense RNA 1 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr21:40275087-40276286 Neighboring gene CAGE-defined mid-level expression enhancer in LOC400867 intron Neighboring gene H3K4me1 hESC enhancer GRCh37_chr21:40286344-40286844 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr21:40286845-40287345 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr21:40316387-40317085 Neighboring gene ReSE screen-validated silencer GRCh37_chr21:40318461-40318589 Neighboring gene long intergenic non-protein coding RNA 1700 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18464 Neighboring gene VISTA enhancer hs1516 Neighboring gene long intergenic non-protein coding RNA 2940 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18465

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_032334.1 

    Range
    101..382
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000021.9 Reference GRCh38.p14 Primary Assembly

    Range
    38894914..38895195
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060945.1 Alternate T2T-CHM13v2.0

    Range
    37278659..37278940
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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