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RNA5SP285 RNA, 5S ribosomal pseudogene 285 [ Homo sapiens (human) ]

Gene ID: 100873538, updated on 17-Sep-2024

Summary

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Official Symbol
RNA5SP285provided by HGNC
Official Full Name
RNA, 5S ribosomal pseudogene 285provided by HGNC
Primary source
HGNC:HGNC:43185
See related
Ensembl:ENSG00000252428 AllianceGenome:HGNC:43185
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RN5S285
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Genomic context

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See RNA5SP285 in Genome Data Viewer
Location:
9q21.13
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (72299720..72299838, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (84450553..84450671, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (74914636..74914754, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene Sharpr-MPRA regulatory region 10456 Neighboring gene guanine deaminase Neighboring gene MED14-independent group 3 enhancer GRCh37_chr9:74761147-74762346 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:74764055-74764556 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:74764557-74765056 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19946 Neighboring gene NME/NM23 nucleoside diphosphate kinase 2 pseudogene Neighboring gene long intergenic non-protein coding RNA 1504 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:74930554-74931102 Neighboring gene hESC enhancers GRCh37_chr9:74979127-74979830 and GRCh37_chr9:74979831-74980535 Neighboring gene zinc finger AN1-type containing 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • RNA, 5S ribosomal 285

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_033368.1 

    Range
    101..219
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    72299720..72299838 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    84450553..84450671 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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