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UGT340C1 UDP-glycosyltransferase UGT340C1 [ Bombyx mori (domestic silkworm) ]

Gene ID: 100862809, updated on 9-Feb-2024

Summary

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Gene symbol
UGT340C1
Gene description
UDP-glycosyltransferase UGT340C1
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bombyx mori
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Bombycidae; Bombycinae; Bombyx
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Genomic context

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See UGT340C1 in Genome Data Viewer
Location:
chromosome: 28
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_01 current ASM3026992v2 (GCF_030269925.1) 28 NC_085134.1 (9139543..9144217, complement)
103 previous assembly Bmori_2016v1.0 (GCF_014905235.1) 28 NC_051385.1 (9118054..9122728, complement)

Chromosome 28 - NC_085134.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134201579 Neighboring gene UDP-glycosyltransferase UGT33Q1 Neighboring gene gloverin 4-like Neighboring gene UDP-glycosyltransferase UGT340C2 Neighboring gene UDP-glycosyltransferase UGT33D3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of the UDP-glycosyltransferase multigene family in insects. Ahn SJ, et al. Insect Biochem Mol Biol, 2012 Feb. PMID 22155036
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-glycosyltransferase UGT340C1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001257033.1 → NP_001243962.1  UDP-glycosyltransferase UGT340C1 precursor

    See identical proteins and their annotated locations for NP_001243962.1

    Status: PROVISIONAL

    Source sequence(s)
    JQ070242
    UniProtKB/TrEMBL
    G9LPT5
    Conserved Domains (2) summary
    PHA03392
    Location:1 → 492
    egt; ecdysteroid UDP-glucosyltransferase; Provisional
    pfam00201
    Location:22 → 503
    UDPGT; UDP-glucoronosyl and UDP-glucosyl transferase

RefSeqs of Annotated Genomes: GCF_030269925.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3026992v2 Primary Assembly

Genomic

  1. NC_085134.1 Reference ASM3026992v2 Primary Assembly

    Range
    9139543..9144217 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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