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Spin2i spindlin family, member 2I [ Mus musculus (house mouse) ]

Gene ID: 100862088, updated on 17-Aug-2024

Summary

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Official Symbol
Spin2iprovided by MGI
Official Full Name
spindlin family, member 2Iprovided by MGI
Primary source
MGI:MGI:5434821
See related
AllianceGenome:MGI:5434821
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm21466
Expression
Restricted expression toward testis adult (RPKM 1.6) See more
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Genomic context

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See Spin2i in Genome Data Viewer
Location:
X A3.1; X
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (31947941..31949611)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (32437174..32438844)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene BTB domain containing 35, family member 2 Neighboring gene STARR-seq mESC enhancer starr_46956 Neighboring gene STARR-seq mESC enhancer starr_46957 Neighboring gene predicted gene 7022 Neighboring gene BTB domain containing 35, family member 1 Neighboring gene predicted gene, 17864

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables methylated histone binding ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
located_in cytosol ISO
Inferred from Sequence Orthology
more info
  
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
  

General protein information

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Preferred Names
spindlin-2A-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    31947941..31949611
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006536337.2 → XP_006536400.1  spindlin-2A-like

    See identical proteins and their annotated locations for XP_006536400.1

    UniProtKB/TrEMBL
    A0A571BDE3, Q149L1
    Conserved Domains (1) summary
    pfam02513
    Location:29 → 78
    Spin-Ssty; Spin/Ssty Family

  2. XM_006536336.2 → XP_006536399.1  spindlin-2A-like

    See identical proteins and their annotated locations for XP_006536399.1

    UniProtKB/TrEMBL
    A0A571BDE3, Q149L1
    Conserved Domains (1) summary
    pfam02513
    Location:29 → 78
    Spin-Ssty; Spin/Ssty Family
Nucleotide Protein Strain
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Gene LinkOut

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Research Materials