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n-R5s139 nuclear encoded rRNA 5S 139 [ Mus musculus (house mouse) ]

Gene ID: 100861493, updated on 17-Aug-2024

Summary

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Official Symbol
n-R5s139provided by MGI
Official Full Name
nuclear encoded rRNA 5S 139provided by MGI
Primary source
MGI:MGI:4421995
See related
Ensembl:ENSMUSG00000119762 AllianceGenome:MGI:4421995
Gene type
rRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Rn5s22
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Genomic context

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See n-R5s139 in Genome Data Viewer
Location:
8 E1; 8 72.1 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (124331685..124331805, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (123604946..123605066, complement)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene 5S RNA, pseudogene 1 Neighboring gene nuclear encoded rRNA 5S 138 Neighboring gene STARR-positive B cell enhancer mm9_chr8:126130461-126130761 Neighboring gene predicted gene, 22109 Neighboring gene nuclear encoded rRNA 5S 141

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequences and evolutionary analysis of mouse 5S rDNAs. Suzuki H, et al. Mol Biol Evol, 1994 Jul. PMID 8078409
  2. Characterization of 5S rRNA genes from mouse. Hallenberg C, et al. Gene, 1994 May 16. PMID 8194767
  3. Rfam: updates to the RNA families database. Gardner PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18953034, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • 5S RNA 22
  • RNA, 5S ribosomal 22

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_046146.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC141881
    Related
    ENSMUST00000239748.1

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    124331685..124331805 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
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