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ABAT 4-aminobutyrate aminotransferase [ Capra hircus (goat) ]

Gene ID: 100861058, updated on 18-Sep-2024

Summary

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Gene symbol
ABAT
Gene description
4-aminobutyrate aminotransferase
See related
EnsemblRapid:ENSCHIG00000022188
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
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Genomic context

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See ABAT in Genome Data Viewer
Location:
chromosome: 25
Exon count:
17
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 25 NC_030832.1 (7440573..7526423)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 25 NC_022317.1 (7617843..7700786)

Chromosome 25 - NC_030832.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 114 Neighboring gene methyltransferase 22, Kin17 lysine Neighboring gene transmembrane protein 186 Neighboring gene phosphomannomutase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gamma-aminobutyric acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
4-aminobutyrate aminotransferase, mitochondrial
Names
mitochondrial 4-aminobutyrate aminotransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030832.1 Reference ASM170441v1 Primary Assembly

    Range
    7440573..7526423
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005697947.3 → XP_005698004.2  4-aminobutyrate aminotransferase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A452FME6, A0A452FMV0
    Related
    ENSCHIP00000025477.2, ENSCHIT00000033339.2
    Conserved Domains (1) summary
    TIGR00699
    Location:34 → 496
    GABAtrns_euk; 4-aminobutyrate aminotransferase, eukaryotic type

  2. XM_018040947.1 → XP_017896436.1  4-aminobutyrate aminotransferase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A452FME6, A0A8C2R213
    Related
    ENSCHIP00000051494.1, ENSCHIT00000045761.1

  3. XM_013974927.2 → XP_013830381.1  4-aminobutyrate aminotransferase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A452FME6, A0A452FMV0
    Related
    ENSCHIP00000025474.2, ENSCHIT00000033336.2
    Conserved Domains (1) summary
    TIGR00699
    Location:34 → 496
    GABAtrns_euk; 4-aminobutyrate aminotransferase, eukaryotic type
Nucleotide Protein
Heading Accession and Version

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