U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

DCN decorin [ Capra hircus (goat) ]

Gene ID: 100860944, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
DCN
Gene description
decorin
See related
EnsemblRapid:ENSCHIG00000018030
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See DCN in Genome Data Viewer
Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 5 NC_030812.1 (20825973..20862672, complement)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 5 NC_022297.1 (20367228..20404241, complement)

Chromosome 5 - NC_030812.1Genomic Context describing neighboring genes Neighboring gene keratocan Neighboring gene lumican Neighboring gene uncharacterized LOC108636127 Neighboring gene transfer RNA cysteine (anticodon ACA)

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
decorin

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001285555.1 → NP_001272484.1  decorin precursor

    See identical proteins and their annotated locations for NP_001272484.1

    Status: PROVISIONAL

    Source sequence(s)
    HQ326237
    UniProtKB/TrEMBL
    A0A452F325, F2X2Y7
    Related
    ENSCHIP00000018742.2, ENSCHIT00000026557.2
    Conserved Domains (4) summary
    smart00013
    Location:55 → 84
    LRRNT; Leucine rich repeat N-terminal domain
    cd00116
    Location:62 → 282
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:63 → 85
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:87 → 142
    LRR_8; Leucine rich repeat

RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030812.1 Reference ASM170441v1 Primary Assembly

    Range
    20825973..20862672 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005679813.3 → XP_005679870.1  decorin isoform X1

    UniProtKB/TrEMBL
    A0A452F311, A0A452F325
    Conserved Domains (4) summary
    smart00013
    Location:55 → 84
    LRRNT; Leucine rich repeat N-terminal domain
    cd00116
    Location:60 → 282
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:63 → 85
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:87 → 142
    LRR_8; Leucine rich repeat
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.