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LYZL4 lysozyme like 4 [ Capra hircus (goat) ]

Gene ID: 100860942, updated on 8-Mar-2024

Summary

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Gene symbol
LYZL4
Gene description
lysozyme like 4
See related
EnsemblRapid:ENSCHIG00000015680
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
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Genomic context

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See LYZL4 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
5
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 22 NC_030829.1 (14468070..14472682, complement)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 22 NC_022314.1 (14417933..14422545, complement)

Chromosome 22 - NC_030829.1Genomic Context describing neighboring genes Neighboring gene trafficking kinesin protein 1 Neighboring gene cholecystokinin Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene vasoactive intestinal peptide receptor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lysozyme activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fusion of sperm to egg plasma membrane involved in single fertilization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in acrosomal vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sperm flagellum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysozyme-like protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001285551.1 → NP_001272480.1  lysozyme-like protein 4 precursor

    See identical proteins and their annotated locations for NP_001272480.1

    Status: PROVISIONAL

    Source sequence(s)
    HQ285239
    UniProtKB/TrEMBL
    A0A8C2P7E6, F2X044
    Related
    ENSCHIP00000014790.1, ENSCHIT00000022589.2
    Conserved Domains (1) summary
    cd16897
    Location:21 → 143
    LYZ_C; C-type lysozyme

RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030829.1 Reference ASM170441v1 Primary Assembly

    Range
    14468070..14472682 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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