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RAB44 RAB44, member RAS oncogene family [ Gallus gallus (chicken) ]

Gene ID: 100859805, updated on 17-Aug-2024

Summary

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Symbol
RAB44provided by CGNC
Full Name
RAB44, member RAS oncogene familyprovided by CGNC
Primary source
CGNC:63348
See related
Ensembl:ENSGALG00010025623
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See RAB44 in Genome Data Viewer
Location:
chromosome: 26
Exon count:
16
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 26 NC_052557.1 (1639025..1651231)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 26 NC_052598.1 (1609709..1621378)

Chromosome 26 - NC_052557.1Genomic Context describing neighboring genes Neighboring gene serine and arginine rich splicing factor 3 Neighboring gene cyclin dependent kinase inhibitor 1A Neighboring gene C6orf89 homolog Neighboring gene peptidase inhibitor 16 Neighboring gene microRNA let-7e Neighboring gene mitochondrial carrier 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein Rab-44

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052557.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    1639025..1651231
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015299123.4 → XP_015154609.2  ras-related protein Rab-44 isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3R6
    Conserved Domains (4) summary
    cd00154
    Location:2094 → 2252
    Rab; Ras-related in brain (Rab) family of small guanosine triphosphatases (GTPases)
    PHA03169
    Location:1291 → 1446
    PHA03169; hypothetical protein; Provisional
    TIGR00927
    Location:428 → 650
    2A1904; K+-dependent Na+/Ca+ exchanger
    pfam15921
    Location:98 → 314
    CCDC158; Coiled-coil domain-containing protein 158

  2. XM_040652892.2 → XP_040508826.1  ras-related protein Rab-44 isoform X5

    UniProtKB/TrEMBL
    A0A8V1A3R6
    Related
    ENSGALP00010038667.1, ENSGALT00010062534.1
    Conserved Domains (3) summary
    cd00154
    Location:1913 → 2071
    Rab; Ras-related in brain (Rab) family of small guanosine triphosphatases (GTPases)
    TIGR00927
    Location:428 → 650
    2A1904; K+-dependent Na+/Ca+ exchanger
    TIGR02169
    Location:104 → 346
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

  3. XM_040652891.2 → XP_040508825.1  ras-related protein Rab-44 isoform X3

    UniProtKB/TrEMBL
    A0A8V1A3R6
    Conserved Domains (3) summary
    cd00154
    Location:1914 → 2072
    Rab; Ras-related in brain (Rab) family of small guanosine triphosphatases (GTPases)
    TIGR00927
    Location:428 → 650
    2A1904; K+-dependent Na+/Ca+ exchanger
    TIGR02169
    Location:104 → 346
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

  4. XM_040652893.2 → XP_040508827.1  ras-related protein Rab-44 isoform X6

    UniProtKB/TrEMBL
    A0A8V1A3R6
    Conserved Domains (4) summary
    cd00154
    Location:1662 → 1820
    Rab; Ras-related in brain (Rab) family of small guanosine triphosphatases (GTPases)
    PHA03169
    Location:859 → 1014
    PHA03169; hypothetical protein; Provisional
    TIGR00927
    Location:428 → 650
    2A1904; K+-dependent Na+/Ca+ exchanger
    TIGR02169
    Location:104 → 346
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

  5. XM_015299127.4 → XP_015154613.2  ras-related protein Rab-44 isoform X4

    Conserved Domains (2) summary
    cd00154
    Location:636 → 794
    Rab; Ras-related in brain (Rab) family of small guanosine triphosphatases (GTPases)
    TIGR02169
    Location:104 → 346
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

  6. XM_015299124.4 → XP_015154610.2  ras-related protein Rab-44 isoform X2

    UniProtKB/TrEMBL
    A0A8V1A3R6
    Conserved Domains (4) summary
    cd00154
    Location:2091 → 2249
    Rab; Ras-related in brain (Rab) family of small guanosine triphosphatases (GTPases)
    PHA03169
    Location:1288 → 1443
    PHA03169; hypothetical protein; Provisional
    TIGR00927
    Location:425 → 647
    2A1904; K+-dependent Na+/Ca+ exchanger
    pfam15921
    Location:98 → 314
    CCDC158; Coiled-coil domain-containing protein 158

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052598.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    1609709..1621378
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040691471.2 → XP_040547405.1  ras-related protein Rab-44 isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3R6
    Conserved Domains (3) summary
    cd00154
    Location:1912 → 2070
    Rab; Ras-related in brain (Rab) family of small guanosine triphosphatases (GTPases)
    TIGR00927
    Location:428 → 650
    2A1904; K+-dependent Na+/Ca+ exchanger
    TIGR02169
    Location:104 → 346
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

  2. XM_040691474.2 → XP_040547408.1  ras-related protein Rab-44 isoform X7

    UniProtKB/TrEMBL
    A0A8V1A3R6
    Conserved Domains (4) summary
    cd00154
    Location:1481 → 1639
    Rab; Ras-related in brain (Rab) family of small guanosine triphosphatases (GTPases)
    PHA03169
    Location:679 → 834
    PHA03169; hypothetical protein; Provisional
    TIGR00927
    Location:428 → 650
    2A1904; K+-dependent Na+/Ca+ exchanger
    TIGR02169
    Location:104 → 346
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

  3. XM_040691473.2 → XP_040547407.1  ras-related protein Rab-44 isoform X3

    UniProtKB/TrEMBL
    A0A8V1A3R6
    Conserved Domains (4) summary
    cd00154
    Location:1732 → 1890
    Rab; Ras-related in brain (Rab) family of small guanosine triphosphatases (GTPases)
    PHA03169
    Location:679 → 834
    PHA03169; hypothetical protein; Provisional
    TIGR00927
    Location:428 → 650
    2A1904; K+-dependent Na+/Ca+ exchanger
    TIGR02169
    Location:104 → 346
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

  4. XM_040691475.2 → XP_040547409.1  ras-related protein Rab-44 isoform X4

    Conserved Domains (3) summary
    cd00154
    Location:636 → 794
    Rab; Ras-related in brain (Rab) family of small guanosine triphosphatases (GTPases)
    TIGR02169
    Location:104 → 346
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
    TIGR02680
    Location:228 → 546
    TIGR02680; TIGR02680 family protein

  5. XM_040691472.2 → XP_040547406.1  ras-related protein Rab-44 isoform X2

    UniProtKB/TrEMBL
    A0A8V1A3R6
    Conserved Domains (3) summary
    cd00154
    Location:1909 → 2067
    Rab; Ras-related in brain (Rab) family of small guanosine triphosphatases (GTPases)
    TIGR00927
    Location:425 → 647
    2A1904; K+-dependent Na+/Ca+ exchanger
    TIGR02168
    Location:156 → 351
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
Nucleotide Protein
Heading Accession and Version

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