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LMAN2L lectin, mannose binding 2 like [ Gallus gallus (chicken) ]

Gene ID: 100858473, updated on 10-Oct-2024

Summary

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Symbol
LMAN2Lprovided by CGNC
Full Name
lectin, mannose binding 2 likeprovided by CGNC
Primary source
CGNC:64614
See related
Ensembl:ENSGALG00010020485
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See LMAN2L in Genome Data Viewer
Location:
chromosome: 22
Exon count:
10
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 22 NC_052553.1 (2987974..2995061)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 22 NC_052594.1 (3104157..3111192)

Chromosome 22 - NC_052553.1Genomic Context describing neighboring genes Neighboring gene semaphorin-4C-like Neighboring gene ankyrin repeat domain 39 Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 4 Neighboring gene fer-1-like 5 Neighboring gene KAT8 regulatory NSL complex subunit 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
VIP36-like protein
Names
VIP36-like protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052553.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    2987974..2995061
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046903433.1 → XP_046759389.1  VIP36-like protein isoform X3

  2. XM_015302407.4 → XP_015157893.2  VIP36-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZEH7
    Related
    ENSGALP00010029255.1, ENSGALT00010049507.1
    Conserved Domains (1) summary
    cd06901
    Location:30 → 289
    lectin_VIP36_VIPL; VIP36 and VIPL type 1 transmembrane proteins, lectin domain

  3. XM_015302408.4 → XP_015157894.2  VIP36-like protein isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZEH7
    Related
    ENSGALP00010029258.1, ENSGALT00010049512.1
    Conserved Domains (1) summary
    cd06901
    Location:30 → 278
    lectin_VIP36_VIPL; VIP36 and VIPL type 1 transmembrane proteins, lectin domain

  4. XM_025142822.3 → XP_024998590.2  VIP36-like protein isoform X4

    Conserved Domains (1) summary
    cl14058
    Location:1 → 199
    lectin_L-type; legume lectins

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052594.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    3104157..3111192
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046931757.1 → XP_046787713.1  VIP36-like protein isoform X3

  2. XM_040689487.2 → XP_040545421.1  VIP36-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZEH7
    Conserved Domains (1) summary
    cd06901
    Location:30 → 289
    lectin_VIP36_VIPL; VIP36 and VIPL type 1 transmembrane proteins, lectin domain

  3. XM_040689488.2 → XP_040545422.1  VIP36-like protein isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZEH7
    Conserved Domains (1) summary
    cd06901
    Location:30 → 278
    lectin_VIP36_VIPL; VIP36 and VIPL type 1 transmembrane proteins, lectin domain

  4. XM_040689491.2 → XP_040545425.1  VIP36-like protein isoform X4

    Conserved Domains (1) summary
    cl14058
    Location:1 → 199
    lectin_L-type; legume lectins
Nucleotide Protein Strain
Heading Accession and Version

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