LRTOMT leucine rich transmembrane and O-methyltransferase domain containing [Gallus gallus (chicken)] - Gene

Summary

Symbol: LRTOMTprovided by CGNC
Full Name: leucine rich transmembrane and O-methyltransferase domain containingprovided by CGNC
Primary source: CGNC:65584
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as: TOMT
Orthologs: mouse all
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Genomic context

Location:: chromosome: 1

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	1	NC_052532.1 (194073301..194075261)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	1	NC_052573.1 (194148072..194150177)

Chromosome 1 - NC_052532.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables catechol O-methyltransferase activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in catecholamine catabolic process	IEA Inferred from Electronic Annotation more info	PubMed
involved_in developmental process	IEA Inferred from Electronic Annotation more info	PubMed
involved_in dopamine metabolic process	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: leucine rich transmembrane and O-methyltransferase domain containing

Names: transmembrane O-methyltransferase

NP_001269010.1

EC 2.1.1.6

XP_015136392.1

EC 2.1.1.6

XP_046762192.1

EC 2.1.1.6

XP_046762193.1

EC 2.1.1.6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001282081.1 → NP_001269010.1 leucine rich transmembrane and O-methyltransferase domain containing

Status: PROVISIONAL

Source sequence(s)

BX930132

Conserved Domains (1) summary

pfam13578
Location:104 → 213

Methyltransf_24; Methyltransferase domain

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Range

194073301..194075261

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_015280906.4 → XP_015136392.1 leucine rich transmembrane and O-methyltransferase domain containing isoform X1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Range

194148072..194150177

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_046906237.1 → XP_046762193.1 leucine rich transmembrane and O-methyltransferase domain containing isoform X1
XM_046906236.1 → XP_046762192.1 leucine rich transmembrane and O-methyltransferase domain containing isoform X2