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GARS1 glycyl-tRNA synthetase 1 [ Canis lupus familiaris (dog) ]

Gene ID: 100856659, updated on 17-Aug-2024

Summary

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Official Symbol
GARS1provided by VGNC
Official Full Name
glycyl-tRNA synthetase 1provided by VGNC
Primary source
VGNC:VGNC:41113
See related
Ensembl:ENSCAFG00845019772
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
GARS
Orthologs
human mouse all
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Genomic context

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See GARS1 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
18
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 14 NC_051818.1 (43249452..43293125)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 14 NC_006596.4 (42741012..42784674)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 14 NC_049235.1 (43402683..43446352)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 14 NC_049274.1 (43365329..43408974)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 14 NC_049755.1 (43041322..43084982)

Chromosome 14 - NC_051818.1Genomic Context describing neighboring genes Neighboring gene nucleotide binding oligomerization domain containing 1 Neighboring gene uncharacterized LOC119867309 Neighboring gene uncharacterized LOC111098816 Neighboring gene gamma-glutamylcyclotransferase Neighboring gene uncharacterized LOC102153651 Neighboring gene corticotropin releasing hormone receptor 2 Neighboring gene MINDY lysine 48 deubiquitinase 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial glycyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycine--tRNA ligase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051818.1 Reference ROS_Cfam_1.0

    Range
    43249452..43293125
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038686852.1 → XP_038542780.1  glycine--tRNA ligase

    UniProtKB/TrEMBL
    A0A8C0MSY5, A0A8I3S467
    Related
    ENSCAFP00845027457.1, ENSCAFT00845035073.1
    Conserved Domains (1) summary
    PLN02734
    Location:63 → 727
    PLN02734; glycyl-tRNA synthetase

RNA

  1. XR_005437421.1 RNA Sequence

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049274.1 Alternate UMICH_Zoey_3.1

    Range
    43365329..43408974
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038494961.1 → XP_038350889.1  glycine--tRNA ligase

    Conserved Domains (1) summary
    PLN02734
    Location:63 → 727
    PLN02734; glycyl-tRNA synthetase

RNA

  1. XR_005335910.1 RNA Sequence

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049755.1 Alternate UNSW_CanFamBas_1.0

    Range
    43041322..43084982
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038621169.1 → XP_038477097.1  glycine--tRNA ligase

    Conserved Domains (1) summary
    PLN02734
    Location:63 → 727
    PLN02734; glycyl-tRNA synthetase

RNA

  1. XR_005403970.1 RNA Sequence

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049235.1 Alternate UU_Cfam_GSD_1.0

    Range
    43402683..43446352
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038557230.1 → XP_038413158.1  glycine--tRNA ligase

    UniProtKB/TrEMBL
    A0A8C0MSY5, A0A8I3S467
    Conserved Domains (1) summary
    PLN02734
    Location:63 → 727
    PLN02734; glycyl-tRNA synthetase

RNA

  1. XR_005369665.1 RNA Sequence

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006596.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    42741012..42784674
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003639490.5 → XP_003639538.1  glycine--tRNA ligase

    UniProtKB/TrEMBL
    A0A8C0MSY5, A0A8I3S467
    Conserved Domains (1) summary
    PLN02734
    Location:63 → 727
    PLN02734; glycyl-tRNA synthetase

RNA

  1. XR_005301269.1 RNA Sequence

Nucleotide Protein
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