PSMA5 proteasome 20S subunit alpha 5 [Canis lupus familiaris (dog)] - Gene

Summary

Official Symbol: PSMA5provided by VGNC
Official Full Name: proteasome 20S subunit alpha 5provided by VGNC
Primary source: VGNC:VGNC:54060
See related: Ensembl:ENSCAFG00845002968
Gene type: protein coding
RefSeq status: MODEL
Organism: Canis lupus familiaris (sub-species: familiaris)
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 6

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
106	current	ROS_Cfam_1.0 (GCF_014441545.1)	6	NC_051810.1 (42756247..42780052)
106	current	Dog10K_Boxer_Tasha (GCF_000002285.5)	6	NC_006588.4 (45200468..45224273)
106	current	UU_Cfam_GSD_1.0 (GCF_011100685.1)	6	NC_049227.1 (42881892..42905703)
106	current	UMICH_Zoey_3.1 (GCF_005444595.1)	6	NC_049266.1 (42489005..42513283)
106	current	UNSW_CanFamBas_1.0 (GCF_013276365.1)	6	NC_049747.1 (42446865..42470654)

Chromosome 6 - NC_051810.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Process	Evidence Code	Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in nucleus	IEA Inferred from Electronic Annotation more info	PubMed
part_of proteasome core complex	IEA Inferred from Electronic Annotation more info	PubMed
part_of proteasome core complex, alpha-subunit complex	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: proteasome subunit alpha type-5

Names: proteasome subunit alpha 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

NC_051810.1 Reference ROS_Cfam_1.0

Range

42756247..42780052

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038669885.1 → XP_038525813.1 proteasome subunit alpha type-5

UniProtKB/TrEMBL

A0A8C0NHD1, A0A8C0QYK5, A0A8I3MGS5, A0A8I3N3S4

Related

ENSCAFP00845004171.1, ENSCAFT00845005248.1

Conserved Domains (1) summary

cd03753
Location:8 → 220

proteasome_alpha_type_5; The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming ...

Alternate UMICH_Zoey_3.1

Genomic

NC_049266.1 Alternate UMICH_Zoey_3.1

Range

42489005..42513283

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038479802.1 → XP_038335730.1 proteasome subunit alpha type-5

Conserved Domains (1) summary

cd03753
Location:8 → 220

proteasome_alpha_type_5; The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming ...

Alternate UNSW_CanFamBas_1.0

Genomic

NC_049747.1 Alternate UNSW_CanFamBas_1.0

Range

42446865..42470654

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038605224.1 → XP_038461152.1 proteasome subunit alpha type-5

Conserved Domains (1) summary

cd03753
Location:8 → 220

proteasome_alpha_type_5; The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming ...

Alternate UU_Cfam_GSD_1.0

Genomic

NC_049227.1 Alternate UU_Cfam_GSD_1.0

Range

42881892..42905703

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038541080.1 → XP_038397008.1 proteasome subunit alpha type-5

UniProtKB/TrEMBL

A0A8C0NHD1, A0A8C0QYK5, A0A8I3MGS5, A0A8I3N3S4

Conserved Domains (1) summary

cd03753
Location:8 → 220

proteasome_alpha_type_5; The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming ...

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

NC_006588.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

Range

45200468..45224273

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_003639136.5 → XP_003639184.1 proteasome subunit alpha type-5

See identical proteins and their annotated locations for XP_003639184.1

UniProtKB/TrEMBL

A0A8C0NHD1, A0A8C0QYK5, A0A8I3MGS5, A0A8I3N3S4

Conserved Domains (1) summary

cd03753
Location:8 → 220

proteasome_alpha_type_5; The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming ...